RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 TMC3Q7Z5M5 1100 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 NFS1Q9Y697 457 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 USH1CQ9Y6N9 552 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 HIP1RO75146 1068 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 GH2P01242 217 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLCO1A2P46721 670 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 ABCB5Q2M3G0 1257 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 FAM20AQ96MK3 541 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 ERVK-5Q9HDB9 667 aa17.13■□□□□ 0.33
SYNCRIP-202ENST00000369622 BTNL10A8MVZ5 291 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 EYA4O95677 639 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 IMPDH2P12268 514 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 SP100P23497 879 aaPredicted RBP17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 JAM2P57087 298 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 ACBD5Q5T8D3 534 aaPredicted RBP17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 LRIG3Q6UXM1 1119 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 ZC3H3Q8IXZ2 948 aaKnown RBP17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 MAIP1Q8WWC4 291 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 GALNT8Q9NY28 637 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 ZBTB21Q9ULJ3 1066 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 GOLGA6L10A0A0M3HER8 536 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 CFAP73A6NFT4 308 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 LMNB1P20700 586 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 DCAF4Q8WV16 495 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 CCDC97Q96F63 343 aaPredicted RBP17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 FGD4Q96M96 766 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
SYNCRIP-202ENST00000369622 FOXN3O00409 490 aaPredicted RBP17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 CREB3O43889 395 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 MYBPC3Q14896 1274 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 CCDC25Q86WR0 208 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 HES6Q96HZ4 224 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 PSMD1Q99460 953 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 UBE2TQ9NPD8 197 aaPredicted RBP17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 WNK3Q9BYP7 1800 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 TISP43B9A030 160 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 CES2O00748 559 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 GAS7O60861 476 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLITRK3O94933 977 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 BMP3P12645 472 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SREBF1P36956 1147 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 MESDQ14696 234 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 CCDC38Q502W7 563 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 CCNJLQ8IV13 435 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SP8Q8IXZ3 490 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLC20A1Q8WUM9 679 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 VAV3Q9UKW4 847 aa17.11■□□□□ 0.33
SYNCRIP-202ENST00000369622 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ETS2P15036 469 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 MAGEA8P43361 318 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 MYL7Q01449 175 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 BIRC3Q13489 604 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 Q4G0T1 1027 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 DCAF12L1Q5VU92 463 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ARMCX6Q7L4S7 300 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 P3H4Q92791 437 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 C18orf8Q96DM3 657 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 STK33Q9BYT3 514 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 FAM129AQ9BZQ8 928 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 FAM114A2Q9NRY5 505 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 STXBP5LQ9Y2K9 1186 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ATMINO43313 823 aaPredicted RBP17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ERMARDQ5T6L9 678 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 FOXB2Q5VYV0 432 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ANKRD23Q86SG2 305 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ALG3Q92685 438 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 BICD1Q96G01 975 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 RAB17Q9H0T7 212 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 TDRD3Q9H7E2 651 aaKnown RBP17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLC16A3O15427 465 aaKnown RBP17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 SLFN11Q7Z7L1 901 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ELMO3Q96BJ8 720 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 NYAP2Q9P242 653 aa17.1■□□□□ 0.33
SYNCRIP-202ENST00000369622 TBX3O15119 743 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 FTLP02792 175 aaPredicted RBP17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 FUT4P22083 530 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 SERPINB4P48594 390 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 MARCKSL1P49006 195 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 FBXO25Q8TCJ0 367 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.339e-8■■■■■ 39.4
SYNCRIP-202ENST00000369622 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 MBOAT7Q96N66 472 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 ALG6Q9Y672 507 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 CDK5RAP2Q96SN8 1893 aa17.09■□□□□ 0.33
SYNCRIP-202ENST00000369622 ECE1P42892 770 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms