RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CHRNA3P32297 505 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PLA2G4AP47712 749 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GNGT1P63211 74 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM50Q86XT4 487 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 ZNF354CQ86Y25 554 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 BEST2Q8NFU1 509 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 SPIRE2Q8WWL2 714 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 DNAJC19Q96DA6 116 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 HEXIM2Q96MH2 286 aaKnown RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 HINFPQ9BQA5 517 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 AP1M1Q9BXS5 423 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 CAPS2Q9BXY5 557 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM49AQ9H0Q0 323 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PRMT7Q9NVM4 692 aaPredicted RBP5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 GPRC5DQ9NZD1 345 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 PCDHB2Q9Y5E7 798 aa5.69□□□□□ -1.5
SMNDC1-202ENST00000369603 FAM170AA1A519 330 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 EML1O00423 815 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CYP26A1O43174 497 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TJP3O95049 919 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 IL18RAPO95256 599 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 VIMP08670 466 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 MAGEA9P43362 315 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NPTX2P47972 431 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 GTF2A2P52657 109 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PLTPP55058 493 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PPATQ06203 517 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 DHX9Q08211 1270 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TAF12Q16514 161 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 MEA1Q16626 185 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SGSM1Q2NKQ1 1148 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PPP1R21Q6ZMI0 780 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SESTD1Q86VW0 696 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SPATS2Q86XZ4 545 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SPATC1LQ9H0A9 340 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 VPS37BQ9H9H4 285 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 AIPL1Q9NZN9 384 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 IP6K2Q9UHH9 426 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NAGPAQ9UK23 515 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CAPN7Q9Y6W3 813 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NCK2O43639 380 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 KRT15P19012 456 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 VPS41P49754 854 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC7A5Q01650 507 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 DHX34Q14147 1143 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SETDB1Q15047 1291 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 KAZNQ674X7 775 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SCARA5Q6ZMJ2 495 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 C1orf186Q6ZWK4 172 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TRAPPC11Q7Z392 1133 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 METTL23Q86XA0 190 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 EFCAB13Q8IY85 973 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TTC13Q8NBP0 860 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PROCA1Q8NCQ7 364 aaPredicted RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 DHX38Q92620 1227 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 HAUS2Q9NVX0 235 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 UBIAD1Q9Y5Z9 338 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 MYH2Q9UKX2 1941 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 C4BP0C0L5 1744 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CCL15-CCL14A0A0B4J2E2 113 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 LRRD1A4D1F6 860 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 MCF2LO15068 1137 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PPP1R11O60927 126 aaPredicted RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 EPHX2P34913 555 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TCF7P36402 384 aaPredicted RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CASP4P49662 377 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CLK2P49760 499 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CAV1Q03135 178 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PPARDQ03181 441 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NCOA4Q13772 614 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 CCL15Q16663 113 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 METTL7BQ6UX53 244 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC30A10Q6XR72 485 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SRLQ86TD4 932 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 RHOT1Q8IXI2 618 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PALM2Q8IXS6 379 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 RNF169Q8NCN4 708 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SLC35G2Q8TBE7 412 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 HSD17B14Q9BPX1 270 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 C11orf70Q9BRQ4 267 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 VIPAS39Q9H9C1 493 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PARVAQ9NVD7 372 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 TRIM10Q9UDY6 481 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 ANAPC5Q9UJX4 755 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NFU1Q9UMS0 254 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 PTPN22Q9Y2R2 807 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 NOC2LQ9Y3T9 749 aaKnown RBP5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 ANKRD36CQ5JPF3 1778 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 SNED1Q8TER0 1413 aa5.68□□□□□ -1.5
SMNDC1-202ENST00000369603 A0A087WUV0 522 aaPredicted RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PRPSAP2O60256 369 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 KLRC1P26715 233 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ARHGAP25P42331 645 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 ACOT2P49753 483 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 PAPD7Q5XG87 772 aaKnown RBP5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 OR6B2Q6IFH4 312 aa5.67□□□□□ -1.5
SMNDC1-202ENST00000369603 CATSPERGQ6ZRH7 1159 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms