RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 FZD8Q9H461 694 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 TRIM10Q9UDY6 481 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 AKT3Q9Y243 479 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 EPN1Q9Y6I3 576 aaPredicted RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 RCCD1A6NED2 376 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 HAS3O00219 553 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 TNNT1P13805 278 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 EIF4A3P38919 411 aaKnown RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 ARHGAP25P42331 645 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 CYP27A1Q02318 531 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 RAPGEF1Q13905 1077 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 FSCN1Q16658 493 aaKnown RBP15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 OLIG1Q8TAK6 271 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 KAT5Q92993 513 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 MSTO1Q9BUK6 570 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 CDHR5Q9HBB8 845 aa15.33■□□□□ 0.04
HMGCS2-201ENST00000369406 FRMPD3Q5JV73 1810 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 MYH10P35580 1976 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 INO80B-WBP1J3KQ70 363 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 MEFVO15553 781 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PGK1P00558 417 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 DLATP10515 647 aaKnown RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 AKR1A1P14550 325 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PSEN2P49810 448 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 ARID5AQ03989 594 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 ASTE1Q2TB18 679 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 CEP120Q8N960 986 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 EDEM3Q9BZQ6 932 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 INO80BQ9C086 356 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PDE11AQ9HCR9 933 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 CITO14578 2027 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 FGFR4P22455 802 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PROZP22891 400 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 YY1P25490 414 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 EFNA5P52803 228 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 ADAM17P78536 824 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 CDK17Q00537 523 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 PURAQ00577 322 aaKnown RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 ENOX2Q16206 610 aaKnown RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 TMEM192Q8IY95 271 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 IQCDQ96DY2 449 aa15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 JPH2Q9BR39 696 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 FAM49AQ9H0Q0 323 aaPredicted RBP15.32■□□□□ 0.04
HMGCS2-201ENST00000369406 CNTNAP2Q9UHC6 1331 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MAGEB2O15479 319 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MXI1P50539 228 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MAPK6Q16659 721 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 IRF2BP2Q7Z5L9 587 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 ZBTB8OSQ8IWT0 167 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 EHBP1Q8NDI1 1231 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MRPL4Q9BYD3 311 aaKnown RBP15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 CCDC175P0C221 793 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 C6orf222P0C671 652 aaPredicted RBP15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MATR3P43243 847 aaKnown RBP eCLIP15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 GPC3P51654 580 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 CPB2Q96IY4 423 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 AP5M1Q9H0R1 490 aa15.31■□□□□ 0.04
HMGCS2-201ENST00000369406 MBLAC1A4D2B0 266 aaPredicted RBP15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 ZNF233A6NK53 670 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 ACKR2O00590 384 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 TREHO43280 583 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 DUSP11O75319 330 aaKnown RBP15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 TOM1L1O75674 476 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 CPT1AP50416 773 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 KIZQ2M2Z5 673 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 C15orf39Q6ZRI6 1047 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 SV2AQ7L0J3 742 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 WDR24Q96S15 920 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 DNAJC12Q9UKB3 198 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 Q9Y3F1 56 aa15.3■□□□□ 0.04
HMGCS2-201ENST00000369406 TFDP1Q14186 410 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 PSMD6Q15008 389 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 ATF7IP2Q5U623 682 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 MFSD14CQ5VZR4 134 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 DNAAF5Q86Y56 855 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 PI4K2AQ9BTU6 479 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 CFHR5Q9BXR6 569 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 NFKBIZQ9BYH8 718 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 LACRTQ9GZZ8 138 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 AIPL1Q9NZN9 384 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 APEX2Q9UBZ4 518 aa15.29■□□□□ 0.04
HMGCS2-201ENST00000369406 FBXL5Q9UKA1 691 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms