RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 LHX8Q68G74 356 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 DPY19L2P1Q6NXN4 242 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 MPZL3Q6UWV2 235 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 DNAJB3Q8WWF6 145 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 SCLT1Q96NL6 688 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 LSM14BQ9BX40 385 aaKnown RBP25.98■■□□□ 1.75
SNX3-203ENST00000368979 TNFSF13BQ9Y275 285 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 LUC7L2Q9Y383 392 aaKnown RBP25.98■■□□□ 1.75
SNX3-203ENST00000368979 FAM189A1O60320 539 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 FECHP22830 423 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 MATR3P43243 847 aaKnown RBP eCLIP25.98■■□□□ 1.75
SNX3-203ENST00000368979 EXOC3L4Q17RC7 722 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 GBP6Q6ZN66 633 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 NEK11Q8NG66 645 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 EDEM3Q9BZQ6 932 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 AGPAT5Q9NUQ2 364 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 NRDCO43847 1150 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 N4BP1O75113 896 aaKnown RBP25.97■■□□□ 1.75
SNX3-203ENST00000368979 CSDE1O75534 798 aaKnown RBP25.97■■□□□ 1.75
SNX3-203ENST00000368979 NOL4O94818 638 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 MSNP26038 577 aaKnown RBP25.97■■□□□ 1.75
SNX3-203ENST00000368979 PON1P27169 355 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 ZBED6P86452 979 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 PPP3CAQ08209 521 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 TMEM62Q0P6H9 643 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 TAF2Q6P1X5 1199 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 NME8Q8N427 588 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 DNAJC7Q99615 494 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 BAG1Q99933 345 aaPredicted RBP25.97■■□□□ 1.75
SNX3-203ENST00000368979 PLCB1Q9NQ66 1216 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 PTPN22Q9Y2R2 807 aa25.97■■□□□ 1.75
SNX3-203ENST00000368979 LRRIQ3A6PVS8 624 aaPredicted RBP25.96■■□□□ 1.75
SNX3-203ENST00000368979 PMM2O15305 246 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 P4HA2O15460 535 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 CABYRO75952 493 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 MYCNP04198 464 aaPredicted RBP25.96■■□□□ 1.75
SNX3-203ENST00000368979 ACOT2P49753 483 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 MYL7Q01449 175 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 NOLC1Q14978 699 aaKnown RBP eCLIP25.96■■□□□ 1.75
SNX3-203ENST00000368979 PSMD6Q15008 389 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 ZBTB41Q5SVQ8 909 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 EEF1DP3Q658K8 133 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 GDF6Q6KF10 455 aaPredicted RBP25.96■■□□□ 1.75
SNX3-203ENST00000368979 USP37Q86T82 979 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 ZNF710Q8N1W2 664 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 KIAA1524Q8TCG1 905 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 GCOM2Q9BZD3 368 aaPredicted RBP25.96■■□□□ 1.75
SNX3-203ENST00000368979 GANQ9H2C0 597 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 GCNT4Q9P109 453 aa25.96■■□□□ 1.75
SNX3-203ENST00000368979 TRIP12Q14669 1992 aaPredicted RBP25.96■■□□□ 1.75
SNX3-203ENST00000368979 GRIN2DO15399 1336 aa25.95■■□□□ 1.75
SNX3-203ENST00000368979 OGTO15294 1046 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 STX10O60499 249 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 TSPAN1O60635 241 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 SLC9A1P19634 815 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 ZBTB33Q86T24 672 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 SH3TC2Q8TF17 1288 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 CCDC127Q96BQ5 260 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 TCHPQ9BT92 498 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 CDHR5Q9HBB8 845 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 CEP72Q9P209 647 aa25.95■■□□□ 1.74
SNX3-203ENST00000368979 MOXD2PA6NHM9 499 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 HARSP12081 509 aaKnown RBP25.94■■□□□ 1.74
SNX3-203ENST00000368979 ACLYP53396 1101 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 CLDN10P78369 228 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 ZNF568Q3ZCX4 644 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 OR8K1Q8NGG5 319 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 OSMRQ99650 979 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 TSEN34Q9BSV6 310 aaKnown RBP25.94■■□□□ 1.74
SNX3-203ENST00000368979 NAA15Q9BXJ9 866 aaKnown RBP25.94■■□□□ 1.74
SNX3-203ENST00000368979 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.94■■□□□ 1.74
SNX3-203ENST00000368979 CDT1Q9H211 546 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 PDZD7Q9H5P4 517 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 SIX2Q9NPC8 291 aa25.94■■□□□ 1.74
SNX3-203ENST00000368979 RBAKQ9NYW8 714 aaPredicted RBP25.94■■□□□ 1.74
SNX3-203ENST00000368979 DARSP14868 501 aaKnown RBP25.93■■□□□ 1.74
SNX3-203ENST00000368979 ARF4P18085 180 aaPredicted RBP25.93■■□□□ 1.74
SNX3-203ENST00000368979 GTF2H1P32780 548 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 GCLMP48507 274 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 APBA1Q02410 837 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 PCBP1Q15365 356 aaKnown RBP eCLIP25.93■■□□□ 1.74
SNX3-203ENST00000368979 TMEM132AQ24JP5 1023 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 FAM47CQ5HY64 1035 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 ZNF397Q8NF99 534 aaPredicted RBP25.93■■□□□ 1.74
SNX3-203ENST00000368979 BAP1Q92560 729 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 TMEM117Q9H0C3 514 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 ERLIN2O94905 339 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 ACTN1P12814 892 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 KCNJ6P48051 423 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 MXI1P50539 228 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 WNT7BP56706 349 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 KLHDC7AQ5VTJ3 777 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 TRIM65Q6PJ69 517 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 BRSK2Q8IWQ3 736 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 TMEM8AQ9HCN3 771 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 FBXL5Q9UKA1 691 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 CPSF3Q9UKF6 684 aaKnown RBP25.93■■□□□ 1.74
SNX3-203ENST00000368979 GINS2Q9Y248 185 aa25.93■■□□□ 1.74
SNX3-203ENST00000368979 ARHGAP6O43182 974 aa25.92■■□□□ 1.74
SNX3-203ENST00000368979 TNFSF9P41273 254 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms