RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 SQORQ9Y6N5 450 aa13.42□□□□□ -0.26
TUBE1-202ENST00000368662 TTLL13PA6NNM8 815 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 GOLGA6L6A8MZA4 724 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 OGTO15294 1046 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
TUBE1-202ENST00000368662 MCF2P10911 925 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 ARF4P18085 180 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-202ENST00000368662 MCCD1P59942 119 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-202ENST00000368662 UBXN1Q04323 297 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 MGAT3Q09327 533 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
TUBE1-202ENST00000368662 FAM26DQ5JW98 314 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 NOTUMQ6P988 496 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 WNT8BQ93098 351 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 ZBTB45Q96K62 511 aaPredicted RBP13.41□□□□□ -0.26
TUBE1-202ENST00000368662 FAM213AQ9BRX8 229 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 TRPV6Q9H1D0 765 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 USP20Q9Y2K6 914 aa13.41□□□□□ -0.26
TUBE1-202ENST00000368662 A0A1W2PQC6 194 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 ABLIM1O14639 778 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 STX10O60499 249 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-202ENST00000368662 POU5F1Q01860 360 aaKnown RBP13.4□□□□□ -0.26
TUBE1-202ENST00000368662 RBL2Q08999 1139 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 DCAF4L1Q3SXM0 396 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
TUBE1-202ENST00000368662 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 FAM126BQ8IXS8 530 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 USP38Q8NB14 1042 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
TUBE1-202ENST00000368662 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 PPP1R9BQ96SB3 815 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 AGPAT5Q9NUQ2 364 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 INTS13Q9NVM9 706 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 GOLGA8IPA6NC78 632 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 GOLGA8JA6NMD2 632 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 GPR182O15218 404 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 CHRNA1P02708 482 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 AFPP02771 609 aaKnown RBP13.4□□□□□ -0.26
TUBE1-202ENST00000368662 CTSHP09668 335 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 COL6A1P12109 1028 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 VAMP7P51809 220 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 KCNH2Q12809 1159 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 BFSP2Q13515 415 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 SLC39A5Q6ZMH5 540 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 MCOLN1Q9GZU1 580 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 HAPLN2Q9GZV7 340 aa13.4□□□□□ -0.26
TUBE1-202ENST00000368662 TEX33O43247 280 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CD4P01730 458 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 HOXA11P31270 313 aaPredicted RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 SPECC1LQ69YQ0 1117 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 TOX2Q96NM4 488 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CDT1Q9H211 546 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CHST12Q9NRB3 414 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 IMPACTQ9P2X3 320 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 FAM189A1O60320 539 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 ADRB2P07550 413 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 CKBP12277 381 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 FGFR4P22455 802 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 PBX1P40424 430 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 ACOT2P49753 483 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 SURF1Q15526 300 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 ZSWIM2Q8NEG5 633 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 PARD3BQ8TEW8 1205 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 ERGIC2Q96RQ1 377 aa13.39□□□□□ -0.27
TUBE1-202ENST00000368662 RBAKQ9NYW8 714 aaPredicted RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 NOC2LQ9Y3T9 749 aaKnown RBP13.39□□□□□ -0.27
TUBE1-202ENST00000368662 KIAA0100Q14667 2235 aaKnown RBP13.38□□□□□ -0.27
TUBE1-202ENST00000368662 ITIH6Q6UXX5 1313 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 GTPBP10A4D1E9 387 aaKnown RBP13.38□□□□□ -0.27
TUBE1-202ENST00000368662 DCDC2CA8MYV0 355 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 P4HA2O15460 535 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 CLTAP09496 248 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 GTF2H1P32780 548 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
TUBE1-202ENST00000368662 CETN1Q12798 172 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 PSMD6Q15008 389 aa13.38□□□□□ -0.27
TUBE1-202ENST00000368662 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms