RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PIGRP01833 764 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 FGFR1P11362 822 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 ITGA4P13612 1032 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 ATF7P17544 494 aaPredicted RBP15.2■□□□□ 0.02
TPM3-211ENST00000368531 AKAP5P24588 427 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 PRCPP42785 496 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 RAB27AP51159 221 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
TPM3-211ENST00000368531 DCAF4L1Q3SXM0 396 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 APBB1IPQ7Z5R6 666 aaPredicted RBP15.2■□□□□ 0.02
TPM3-211ENST00000368531 NPAS4Q8IUM7 802 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 CEP120Q8N960 986 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 POMGNT1Q8WZA1 660 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 TOP1MTQ969P6 601 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 SLC9A7Q96T83 725 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 MSTO1Q9BUK6 570 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 KLK14Q9P0G3 267 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 ZMYM2Q9UBW7 1377 aa15.2■□□□□ 0.02
TPM3-211ENST00000368531 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
TPM3-211ENST00000368531 ABLIM1O14639 778 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 TGFB1I1O43294 461 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 ZNF623O75123 536 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 BMP6P22004 513 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 PROZP22891 400 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 MORC3Q14149 939 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
TPM3-211ENST00000368531 BMT2Q1RMZ1 405 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 PAN2Q504Q3 1202 aaKnown RBP15.19■□□□□ 0.02
TPM3-211ENST00000368531 SLFN12LQ6IEE8 588 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 ARMCX5Q6P1M9 558 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 HERC6Q8IVU3 1022 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 SYAP1Q96A49 352 aaPredicted RBP15.19■□□□□ 0.02
TPM3-211ENST00000368531 PGBD4Q96DM1 585 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 TRAIPQ9BWF2 469 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 RNF19AQ9NV58 838 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 INPP5FQ9Y2H2 1132 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 CITO14578 2027 aa15.19■□□□□ 0.02
TPM3-211ENST00000368531 A0A0B4J269 797 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 GOLGA8IPA6NC78 632 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 GOLGA8JA6NMD2 632 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 KIF20AO95235 890 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 EOMESO95936 686 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 MCF2P10911 925 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 MYOGP15173 224 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 CD44P16070 742 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 ADSSP30520 456 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 ACOT2P49753 483 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 MCL1Q07820 350 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 AGMOQ6ZNB7 445 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 FAM43BQ6ZT52 329 aaPredicted RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 MRPL10Q7Z7H8 261 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 ZNF598Q86UK7 904 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 ZSWIM2Q8NEG5 633 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 PHOSPHO2Q8TCD6 241 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 SAAL1Q96ER3 474 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 YME1L1Q96TA2 773 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
TPM3-211ENST00000368531 CCDC94Q9BW85 323 aaPredicted RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 ELAC1Q9H777 363 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 AGO2Q9UKV8 859 aaKnown RBP15.18■□□□□ 0.02
TPM3-211ENST00000368531 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 TBKBP1A7MCY6 615 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 OGTO15294 1046 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 TLL1O43897 1013 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 DGKIO75912 1065 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 RECQL4O94761 1208 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 GJB5O95377 273 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 TNFSF9P41273 254 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 CYP2J2P51589 502 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 STIM1Q13586 685 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 CLLU1OSQ5K130 101 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 CRIPAKQ8N1N5 446 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 TRIML1Q8N9V2 468 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 ACAP3Q96P50 834 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 GAD1Q99259 594 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 FAM213AQ9BRX8 229 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 KCTD10Q9H3F6 313 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 RSAD1Q9HA92 442 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 AGPAT3Q9NRZ7 376 aa15.17■□□□□ 0.02
TPM3-211ENST00000368531 TYW1Q9NV66 732 aaKnown RBP15.17■□□□□ 0.02
TPM3-211ENST00000368531 CEP290O15078 2479 aa15.16■□□□□ 0.02
TPM3-211ENST00000368531 PPP1R3GB7ZBB8 358 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms