RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 WDR44Q5JSH3 913 aa11□□□□□ -0.65
TPM3-209ENST00000368527 C1orf220Q5T0J3 134 aa11□□□□□ -0.65
TPM3-209ENST00000368527 LRRC31Q6UY01 552 aa11□□□□□ -0.65
TPM3-209ENST00000368527 CEP128Q6ZU80 1094 aa11□□□□□ -0.65
TPM3-209ENST00000368527 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
TPM3-209ENST00000368527 HOOK3Q86VS8 718 aa11□□□□□ -0.65
TPM3-209ENST00000368527 KSR1Q8IVT5 923 aa11□□□□□ -0.65
TPM3-209ENST00000368527 TSEN2Q8NCE0 465 aaKnown RBP11□□□□□ -0.65
TPM3-209ENST00000368527 REPS2Q8NFH8 660 aa11□□□□□ -0.65
TPM3-209ENST00000368527 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
TPM3-209ENST00000368527 ZSWIM1Q9BR11 485 aa11□□□□□ -0.65
TPM3-209ENST00000368527 ERP44Q9BS26 406 aa11□□□□□ -0.65
TPM3-209ENST00000368527 STMN4Q9H169 189 aaPredicted RBP11□□□□□ -0.65
TPM3-209ENST00000368527 PCIF1Q9H4Z3 704 aa11□□□□□ -0.65
TPM3-209ENST00000368527 HOMER3Q9NSC5 361 aa11□□□□□ -0.65
TPM3-209ENST00000368527 PKD2L1Q9P0L9 805 aa11□□□□□ -0.65
TPM3-209ENST00000368527 SLC9A2Q9UBY0 812 aa11□□□□□ -0.65
TPM3-209ENST00000368527 MTRF1LQ9UGC7 380 aaKnown RBP11□□□□□ -0.65
TPM3-209ENST00000368527 PCYOX1Q9UHG3 505 aa11□□□□□ -0.65
TPM3-209ENST00000368527 GGA2Q9UJY4 613 aa11□□□□□ -0.65
TPM3-209ENST00000368527 NOCTQ9UK39 431 aaKnown RBP11□□□□□ -0.65
TPM3-209ENST00000368527 PACSIN2Q9UNF0 486 aaPredicted RBP11□□□□□ -0.65
TPM3-209ENST00000368527 ALG6Q9Y672 507 aa11□□□□□ -0.65
TPM3-209ENST00000368527 STYXL1Q9Y6J8 313 aa11□□□□□ -0.65
TPM3-209ENST00000368527 FER1L6Q2WGJ9 1857 aa11□□□□□ -0.65
TPM3-209ENST00000368527 TULP2O00295 520 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 EBAG9O00559 213 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 NDC80O14777 642 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 KCNA2P16389 499 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 PTPRAP18433 802 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ABCB4P21439 1286 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CTNNA1P35221 906 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 COPB2P35606 906 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 DR1Q01658 176 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 POU5F1Q01860 360 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 PSMD6Q15008 389 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 STXBP2Q15833 593 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 SNRNP48Q6IEG0 339 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 ACAD10Q6JQN1 1059 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ANO5Q75V66 913 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ARMC9Q7Z3E5 817 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 GPIHBP1Q8IV16 184 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ARHGEF19Q8IW93 802 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CDAN1Q8IWY9 1227 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 PPM1KQ8N3J5 372 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 RDH13Q8NBN7 331 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 POMGNT1Q8WZA1 660 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ATG4CQ96DT6 458 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 VCPIP1Q96JH7 1222 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 GDAP1L1Q96MZ0 367 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CEP89Q96ST8 783 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 FMO2Q99518 471 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 THAP2Q9H0W7 228 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CNOT10Q9H9A5 744 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 PDLIM7Q9NR12 457 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CYP26B1Q9NR63 512 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 C1orf112Q9NSG2 853 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 ARHGAP28Q9P2N2 729 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 GABBR1Q9UBS5 961 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 CNOT7Q9UIV1 285 aaKnown RBP10.99□□□□□ -0.65
TPM3-209ENST00000368527 HACL1Q9UJ83 578 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM3-209ENST00000368527 PCDHA3Q9Y5H8 950 aa10.99□□□□□ -0.65
TPM3-209ENST00000368527 FZD9O00144 591 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 HNRNPDLO14979 420 aaKnown RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 LRRN2O75325 713 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 PPFIA2O75334 1257 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 SUPT20HL2P0C7V6 817 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 CYP11B1P15538 503 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 NR1D1P20393 614 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 TBXAS1P24557 533 aaPredicted RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 CETN2P41208 172 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 NAMPTP43490 491 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 GMPSP49915 693 aaPredicted RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 RWDD2BP57060 319 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 DLG4P78352 724 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 PTP4A2Q12974 167 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 GRM1Q13255 1194 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 SLMAPQ14BN4 828 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 SURF1Q15526 300 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 CYP1B1Q16678 543 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 UGCGQ16739 394 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 LIN9Q5TKA1 542 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 DUPD1Q68J44 220 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 ABHD15Q6UXT9 468 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 CATSPERGQ6ZRH7 1159 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 CYFIP1Q7L576 1253 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 MAEAQ7L5Y9 396 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 ZNF564Q8TBZ8 553 aaPredicted RBP10.98□□□□□ -0.65
TPM3-209ENST00000368527 SLCO2A1Q92959 643 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 ARHGEF26Q96DR7 871 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 BICD1Q96G01 975 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 FAM167AQ96KS9 214 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 AP1M1Q9BXS5 423 aa10.98□□□□□ -0.65
TPM3-209ENST00000368527 DDX47Q9H0S4 455 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms