RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 APOEP02649 317 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 CUL1Q13616 776 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 EMC2Q15006 297 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 LRRC14Q15048 493 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 EGFL8Q99944 293 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
PTPRK-207ENST00000368226 PDCLQ13371 301 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 TMEM259Q4ZIN3 620 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 SEZ6Q53EL9 994 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 SMYD3Q9H7B4 428 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 TUFT1Q9NNX1 390 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 SEL1LQ9UBV2 794 aa13.69□□□□□ -0.22
PTPRK-207ENST00000368226 GOLGA8QA0A0J9YX86 632 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 GOLGA8OA6NCC3 632 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 GOLGA8NF8WBI6 632 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 UBE2Q2LH0YL09 131 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 STXBP3O00186 592 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 MMEP08473 750 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 CDR2Q01850 454 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PPARGC1AQ9UBK2 798 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 CHORDC1Q9UHD1 332 aaPredicted RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 KRT37O76014 449 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ADCY2Q08462 1091 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ALG13Q9NP73 1137 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ORC6Q9Y5N6 252 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 C2CD2LO14523 706 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 MTM1Q13496 603 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 CAPRIN1Q14444 709 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 CRLF3Q8IUI8 442 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 GUF1Q8N442 669 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PARK7Q99497 189 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 AGPAT1Q99943 283 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 RFX7Q2KHR2 1363 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 MADDQ8WXG6 1647 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PODXLO00592 558 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ZNF185O15231 689 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 RCAN1P53805 252 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
PTPRK-207ENST00000368226 IMPG1Q17R60 797 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ATG16L1Q676U5 607 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ZFYVE28Q9HCC9 887 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 E2F8A0AVK6 867 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 CFAP69A5D8W1 941 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 KLK7P49862 253 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ANTXR2P58335 489 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 ZNF560Q96MR9 790 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 FBXO28Q9NVF7 368 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 TJP2Q9UDY2 1190 aa13.68□□□□□ -0.22
PTPRK-207ENST00000368226 DNAJC6O75061 913 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 GH1P01241 217 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 EEF1B2P24534 225 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 KCNJ6P48051 423 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PMS2P54278 862 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 NLRP11P59045 1033 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PRAMEP78395 509 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 VEPH1Q14D04 833 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 RBBP7Q16576 425 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 AMHR2Q16671 573 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 EPM2AIP1Q7L775 607 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 YAF2Q8IY57 180 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ZNF507Q8TCN5 953 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SYNDIG1Q9H7V2 258 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PLEKHA5Q9HAU0 1116 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 SLC13A4Q9UKG4 626 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 MIF4GDA9UHW6 222 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ATMINO43313 823 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TAL1P17542 331 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 CCDC137Q6PK04 289 aaKnown RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 USP49Q70CQ1 688 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PITPNM3Q9BZ71 974 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 FGFR4P22455 802 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
PTPRK-207ENST00000368226 GGCXP38435 758 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 PEX19P40855 299 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 ZNF235Q14590 738 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 TMEM132DQ14C87 1099 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 EPC2Q52LR7 807 aa13.67□□□□□ -0.22
PTPRK-207ENST00000368226 BHMTQ93088 406 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms