RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TARSP26639 723 aaKnown RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 CC2D2BQ6DHV5 1058 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 CNPY4Q8N129 248 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 CYP2W1Q8TAV3 490 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 PPP4R1Q8TF05 950 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 BAP1Q92560 729 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 ZNF668Q96K58 619 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-201ENST00000361866 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 RIC1Q4ADV7 1423 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 NDUFB10O96000 172 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 COG2Q14746 738 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 P3H1Q32P28 736 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SPATA24Q86W54 205 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 SEPT10Q9P0V9 454 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 STOML1Q9UBI4 398 aa14.81□□□□□ -0.04
COL6A1-201ENST00000361866 EPHB1P54762 984 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 CEP55Q53EZ4 464 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-201ENST00000361866 KCTD6Q8NC69 237 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 SMC1BQ8NDV3 1235 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 HSPH1Q92598 858 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 SLC13A1Q9BZW2 595 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 IFT122Q9HBG6 1241 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 FAM53CQ9NYF3 392 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 PFASO15067 1338 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 MYO3BQ8WXR4 1341 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 ESYT2A0FGR8 921 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 DDX3XO00571 662 aaKnown RBP eCLIP14.8□□□□□ -0.043e-6■■■■■ 41.3
COL6A1-201ENST00000361866 COG7P83436 770 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 GIT2Q14161 759 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 LRRC36Q1X8D7 754 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 EEPD1Q7L9B9 569 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 IQCKQ8N0W5 287 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 ATL2Q8NHH9 583 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 DCAF4Q8WV16 495 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 ZKSCAN4Q969J2 545 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-201ENST00000361866 FAM129AQ9BZQ8 928 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 TRPC6Q9Y210 931 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-201ENST00000361866 MCF2LO15068 1137 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 TJP3O95049 919 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 COILP38432 576 aaPredicted RBP14.8□□□□□ -0.04
COL6A1-201ENST00000361866 CASP5P51878 434 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 CYFIP1Q7L576 1253 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 PPM1NQ8N819 430 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 LINC00116Q8NCU8 138 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 GSDMBQ8TAX9 411 aa14.8□□□□□ -0.04
COL6A1-201ENST00000361866 KIF1CO43896 1103 aaKnown RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 ITGB3BPQ13352 177 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 LRRC55Q6ZSA7 311 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SLC13A5Q86YT5 568 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 MSL3Q8N5Y2 521 aaKnown RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 FBXL13Q8NEE6 735 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 KAT2BQ92831 832 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 CCDC124Q96CT7 223 aaKnown RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 AIPL1Q9NZN9 384 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 PJA2O43164 708 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 TRAPPC3O43617 180 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SHBGP04278 402 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 ARFIP2P53365 341 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 RNASELQ05823 741 aaKnown RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 OVGP1Q12889 678 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 MTMR1Q13613 665 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 GRAMD1BQ3KR37 738 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 RINT1Q6NUQ1 792 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SLC7A3Q8WY07 619 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 TNFRSF25Q93038 417 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 HSPBP1Q9NZL4 362 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 MARCOQ9UEW3 520 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 K7ERI5 159 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 NCF2P19878 526 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 FLT3P36888 993 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 ATP6V0A1Q93050 837 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 ACSF2Q96CM8 615 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 CDC42EP4Q9H3Q1 356 aaKnown RBP14.79□□□□□ -0.04
COL6A1-201ENST00000361866 PICK1Q9NRD5 415 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SMYD2Q9NRG4 433 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SEL1LQ9UBV2 794 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 PITPNM2Q9BZ72 1349 aa14.79□□□□□ -0.04
COL6A1-201ENST00000361866 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 TRPA1O75762 1119 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 COPS2P61201 443 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 CCDC14Q49A88 953 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 ERICH1Q86X53 443 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 AGPAT3Q9NRZ7 376 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 HAO1Q9UJM8 370 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 INO80B-WBP1J3KQ70 363 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 PAX7P23759 505 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 PSMA2P25787 234 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 CPA2P48052 419 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 YARSP54577 528 aaKnown RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 GRIK5Q16478 980 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 TRMT10CQ7L0Y3 403 aaKnown RBP14.78□□□□□ -0.04
COL6A1-201ENST00000361866 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
COL6A1-201ENST00000361866 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms