RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 STIM1Q13586 685 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 ZNF568Q3ZCX4 644 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 HERC6Q8IVU3 1022 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 C12orf56Q8IXR9 622 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 SMG8Q8ND04 991 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 EIF2AQ9BY44 585 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 MAN1B1Q9UKM7 699 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 GIT1Q9Y2X7 761 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 INSL6Q9Y581 213 aa15.12■□□□□ 0.01
NSMCE1-201ENST00000361439 CARNS1A5YM72 827 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 INPPL1O15357 1258 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 DGKIO75912 1065 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 NPTXRO95502 500 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 ITGA4P13612 1032 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 HOXD13P35453 343 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 GRM5P41594 1212 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 HTRA4P83105 476 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 NFIL3Q16649 462 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 CT47A1Q5JQC4 288 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 EEF1DP3Q658K8 133 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 FOXR2Q6PJQ5 311 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 GLIS3Q8NEA6 775 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 TSPAN18Q96SJ8 248 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 RAD9AQ99638 391 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 CDT1Q9H211 546 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 TOPORSQ9NS56 1045 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 TYW1Q9NV66 732 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 ANKFY1Q9P2R3 1169 aa15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-201ENST00000361439 OGTO15294 1046 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 TGFB1I1O43294 461 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ATF7P17544 494 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ADSSP30520 456 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 SMAD3P84022 425 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 GLB1LQ6UWU2 654 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ADSSL1Q8N142 457 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 POMGNT1Q8WZA1 660 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 DHTKD1Q96HY7 919 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ZBTB45Q96K62 511 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 MSTO1Q9BUK6 570 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 MRPL9Q9BYD2 267 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 KCTD10Q9H3F6 313 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 PLEKHA5Q9HAU0 1116 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 RC3H2Q9HBD1 1191 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 KANSL3Q9P2N6 904 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 AGO2Q9UKV8 859 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 PCDHA11Q9Y5I1 949 aa15.1■□□□□ 0.01
NSMCE1-201ENST00000361439 ANKRD63C9JTQ0 380 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 PSMA7O14818 248 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CALUO43852 315 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CLTAP09496 248 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 PRCPP42785 496 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 YARSP54577 528 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 RAB30Q15771 203 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 EDRF1Q3B7T1 1238 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CENPPQ6IPU0 288 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 ARMCX5Q6P1M9 558 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 AGMOQ6ZNB7 445 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CD302Q8IX05 232 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 NELFCDQ8IXH7 590 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 CMTR2Q8IYT2 770 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 MLKLQ8NB16 471 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 ACAP3Q96P50 834 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 ZBED2Q9BTP6 218 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 NXF3Q9H4D5 531 aaKnown RBP15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 RSAD1Q9HA92 442 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 AGPAT3Q9NRZ7 376 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
NSMCE1-201ENST00000361439 TLL1O43897 1013 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 FAM189A1O60320 539 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 UPP2O95045 317 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 ADRB2P07550 413 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 BMP6P22004 513 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 RPL13P26373 211 aaKnown RBP15.08■□□□□ 0
NSMCE1-201ENST00000361439 LRRC63Q05C16 580 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 ZBTB33Q86T24 672 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
NSMCE1-201ENST00000361439 FBXL18Q96ME1 805 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 CASD1Q96PB1 797 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 YME1L1Q96TA2 773 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 HAPLN2Q9GZV7 340 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 DACH1Q9UI36 760 aa15.08■□□□□ 0
NSMCE1-201ENST00000361439 MSRAQ9UJ68 235 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms