RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 AKAP5P24588 427 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 GPC3P51654 580 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CDH8P55286 799 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 GSDMDP57764 484 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ETF1P62495 437 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 SOX4Q06945 474 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 FAM47CQ5HY64 1035 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 TEX2Q8IWB9 1127 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SLC35F6Q8N357 371 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 PPM1KQ8N3J5 372 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CCDC150Q8NCX0 1101 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 KIFAP3Q92845 792 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 APBA2Q99767 749 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MSTO1Q9BUK6 570 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 PLEKHA4Q9H4M7 779 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SIX4Q9UIU6 781 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 AGO2Q9UKV8 859 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 ZNF215Q9UL58 517 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 PACSIN2Q9UNF0 486 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 AKT3Q9Y243 479 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 BRCA1P38398 1863 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 MACROD2A1Z1Q3 448 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 DCAF8L1A6NGE4 600 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ATMINO43313 823 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 AKR1B10O60218 316 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 APLP1P51693 650 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MYL6P60660 151 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CYP24A1Q07973 514 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 NFX1Q12986 1120 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 NOGQ13253 232 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 FKBP15Q5T1M5 1219 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 IQSEC1Q6DN90 963 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 FRMD5Q7Z6J6 570 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 NOP9Q86U38 636 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 SLC9A9Q8IVB4 645 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ARHGEF26Q96DR7 871 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SPAG5Q96R06 1193 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 TRPV6Q9H1D0 765 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 UBE2TQ9NPD8 197 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 GCNT4Q9P109 453 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SEL1LQ9UBV2 794 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SMCHD1A6NHR9 2005 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ITIH6Q6UXX5 1313 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MYH7P12883 1935 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 B4GALT3O60512 393 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 NFICP08651 508 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MXI1P50539 228 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 DMP1Q13316 513 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 BRDTQ58F21 947 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 DAB2IPQ5VWQ8 1189 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 TDRD10Q5VZ19 366 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 FAM160B1Q5W0V3 765 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 GDF6Q6KF10 455 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 CACNA2D4Q7Z3S7 1137 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MICALL1Q8N3F8 863 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 EHBP1Q8NDI1 1231 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 C18orf25Q96B23 403 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 ZFP42Q96MM3 310 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ACO2Q99798 780 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 MIOSQ9NXC5 875 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 HCSTQ9UBK5 93 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 HAS3O00219 553 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CALUO43852 315 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 MGEA5O60502 916 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 HLA-DRAP01903 254 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 WEE2P0C1S8 567 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 HOXD8P13378 290 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 RGS2P41220 211 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MAGEA1P43355 309 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 MFSD10Q14728 455 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SLC10A6Q3KNW5 377 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 ZNF569Q5MCW4 686 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 IER5Q5VY09 327 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 LHX8Q68G74 356 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CCSAPQ6IQ19 270 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 SCARA5Q6ZMJ2 495 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 C15orf39Q6ZRI6 1047 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 PPTC7Q8NI37 304 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SCLT1Q96NL6 688 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 PANX2Q96RD6 677 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 SYT11Q9BT88 431 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 RNF216Q9NWF9 866 aaPredicted RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 KCND2Q9NZV8 630 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 CPSF3Q9UKF6 684 aaKnown RBP3.11□□□□□ -1.91
LTN1-201ENST00000361371 POLIQ9UNA4 740 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 STYXL1Q9Y6J8 313 aa3.11□□□□□ -1.91
LTN1-201ENST00000361371 PDE2AO00408 941 aaPredicted RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TOM1L1O75674 476 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MOCS3O95396 460 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 EPB41P11171 864 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 TNNI1P19237 187 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 CD58P19256 250 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RPL13P26373 211 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 PSEN2P49810 448 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 KIF11P52732 1056 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 RABGGTBP53611 331 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PURAQ00577 322 aaKnown RBP3.1□□□□□ -1.91
LTN1-201ENST00000361371 KLHL30Q0D2K2 578 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 MBTPS1Q14703 1052 aa3.1□□□□□ -1.91
LTN1-201ENST00000361371 PTPN14Q15678 1187 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms