RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 FDX1P10109 184 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 GBP7Q8N8V2 638 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 CFAP36Q96G28 342 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 VCX3BQ9H321 246 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 SNX25Q9H3E2 840 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 TXLNGQ9NUQ3 528 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 SUCLA2Q9P2R7 463 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 FOXN3O00409 490 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 EPC2Q52LR7 807 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 NXNQ6DKJ4 435 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 NSMCE1Q8WV22 266 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 TMEM143Q96AN5 459 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 SNF8Q96H20 258 aa17.41■□□□□ 0.38
SCAF1-201ENST00000360565 FAM49AQ9H0Q0 323 aaPredicted RBP17.41■□□□□ 0.38
SCAF1-201ENST00000360565 MEFVO15553 781 aaPredicted RBP17.4■□□□□ 0.38
SCAF1-201ENST00000360565 IL1R1P14778 569 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 SREBF1P36956 1147 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 KCNK18Q7Z418 384 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 AFAP1L2Q8N4X5 818 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 DNAAF3Q8N9W5 541 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 FAM167AQ96KS9 214 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 HEY1Q9Y5J3 304 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 PHF2O75151 1096 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 PSMC1P62191 440 aaKnown RBP17.4■□□□□ 0.38
SCAF1-201ENST00000360565 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
SCAF1-201ENST00000360565 CCT6BQ92526 530 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 LPAR1Q92633 364 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 SCYL1Q96KG9 808 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 THAP2Q9H0W7 228 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 MON2Q7Z3U7 1717 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 FER1L4A9Z1Z3 1794 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 IRX4P78413 519 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 MOXD1Q6UVY6 613 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 TRIM72Q6ZMU5 477 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ARL8AQ96BM9 186 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ERP44Q9BS26 406 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 GIPC1O14908 333 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 PDCD7Q8N8D1 485 aaKnown RBP17.4■□□□□ 0.38
SCAF1-201ENST00000360565 TTC13Q8NBP0 860 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ATL2Q8NHH9 583 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ZNF473Q8WTR7 871 aaKnown RBP17.4■□□□□ 0.38
SCAF1-201ENST00000360565 CASKIN2Q8WXE0 1202 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 TTC17Q96AE7 1141 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 ZDHHC15Q96MV8 337 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 KLHL11Q9NVR0 708 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 IP6K2Q9UHH9 426 aa17.4■□□□□ 0.38
SCAF1-201ENST00000360565 MAPK13O15264 365 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 OSBPP22059 807 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 SHMT1P34896 483 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 ICE2Q659A1 982 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 ZNF571Q7Z3V5 609 aaPredicted RBP17.39■□□□□ 0.37
SCAF1-201ENST00000360565 SPATA24Q86W54 205 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 OR6B3Q8NGW1 331 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 FAF2Q96CS3 445 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 NACA2Q9H009 215 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 LRRC4Q9HBW1 653 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 RAB21Q9UL25 225 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 CHUKO15111 745 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
SCAF1-201ENST00000360565 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
SCAF1-201ENST00000360565 RSBN1LQ6PCB5 846 aaPredicted RBP17.39■□□□□ 0.37
SCAF1-201ENST00000360565 KIFC3Q9BVG8 833 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 DDX4Q9NQI0 724 aaKnown RBP17.39■□□□□ 0.37
SCAF1-201ENST00000360565 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 ZBTB7AO95365 584 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 MYBL1P10243 752 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 TFDP2Q14188 446 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 DUOXA2Q1HG44 320 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 LRIG3Q6UXM1 1119 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 C9orf72Q96LT7 481 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 PI4K2AQ9BTU6 479 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 TIPINQ9BVW5 301 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 CARD9Q9H257 536 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
SCAF1-201ENST00000360565 A0A0G2JND7 137 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 ARP10275 920 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 CNGA1P29973 690 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 TRIM42Q8IWZ5 723 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 MYCBPQ99417 103 aaPredicted RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 ADAM33Q9BZ11 813 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 IQANK1A0A1B0GTG1 560 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 GPC3P51654 580 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 RPS6P62753 249 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 PDIA2Q13087 525 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.38■□□□□ 0.372e-8■■□□□ 12.1
SCAF1-201ENST00000360565 RPS6KC1Q96S38 1066 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 TMEM117Q9H0C3 514 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 UNC45AQ9H3U1 944 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 GARSP41250 739 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 ACTN3Q08043 901 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms