RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 TEX28O15482 410 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 CDC27P30260 824 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 PPM1NQ8N819 430 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 PLOD1Q02809 727 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 SLC9A5Q14940 896 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 VEPH1Q14D04 833 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 CD2BP2O95400 341 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 GUCA1AP43080 201 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 HPCAP84074 193 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 POU5F1BQ06416 359 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 C16orf89Q6UX73 402 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 STAG2Q8N3U4 1231 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 LEMD3Q9Y2U8 911 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 LINC00301Q8NCQ3 95 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 BTN2A2Q8WVV5 523 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIM63Q969Q1 353 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 ASIC4Q96FT7 647 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 XDHP47989 1333 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 FGFR4P22455 802 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 GPS1Q13098 491 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIM72Q6ZMU5 477 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 DDIASQ8IXT1 998 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 MRPL1Q9BYD6 325 aaKnown RBP13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 ANAPC7Q9UJX3 599 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 ANGPT2O15123 496 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 MCPH1Q8NEM0 835 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 SORBS3O60504 671 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 MXI1P50539 228 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ANXA11P50995 505 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 NLRP9Q7RTR0 991 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 HEXIM2Q96MH2 286 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 RAD21L1Q9H4I0 556 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 STXBP2Q15833 593 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 DCUN1D1Q96GG9 259 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 APOL6Q9BWW8 343 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 TAF5LO75529 589 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 GCP02774 474 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 FAM160B2Q86V87 743 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 K7ERI5 159 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 GYS1P13807 737 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 RASGRF1Q13972 1273 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 RBBP7Q16576 425 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ZBED8Q8IZ13 594 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 NUP93Q8N1F7 819 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 EDC3Q96F86 508 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ALDH1A1P00352 501 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 ARL4DP49703 201 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 INAQ16352 499 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 CDO1Q16878 200 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 TTC33Q6PID6 262 aaPredicted RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 DSTYKQ6XUX3 929 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 TNPO2O14787 897 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 RGS5O15539 181 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 PSMD3O43242 534 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 CSTF3Q12996 717 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 NCAPHQ15003 741 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 CYB5D1Q6P9G0 228 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 IYDQ6PHW0 289 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 DDI1Q8WTU0 396 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 PIDD1Q9HB75 910 aa13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 H2AFY2Q9P0M6 372 aaPredicted RBP13.92□□□□□ -0.18
SRGAP3-201ENST00000360413 YEATS2Q9ULM3 1422 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 CCT8L1PA6NM43 557 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 VSNL1P62760 191 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 MICU2Q8IYU8 434 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PROM2Q8N271 834 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 HEMGNQ9BXL5 484 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 RCOR1Q9UKL0 485 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 BAZ2BQ9UIF8 2168 aaKnown RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 TNKSO95271 1327 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 CHRNA3P32297 505 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 SOX6P35712 828 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PHKA2P46019 1235 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 ERP27Q96DN0 273 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 CEP170P1Q96L14 293 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PPCSQ9HAB8 311 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 ETAA1Q9NY74 926 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 MAPKBP1O60336 1514 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 ABCC10Q5T3U5 1492 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 LBRQ14739 615 aaKnown RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 YAF2Q8IY57 180 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 PLEKHA8Q96JA3 519 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 SCN3BQ9NY72 215 aa13.91□□□□□ -0.18
SRGAP3-201ENST00000360413 HUS1O60921 280 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms