RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 THTPAQ9BU02 230 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
COL11A1-202ENST00000358392 XDHP47989 1333 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 STXBP3O00186 592 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 DPYSL4O14531 572 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 PCP11498 1178 aaKnown RBP11.82□□□□□ -0.52
COL11A1-202ENST00000358392 STAT3P40763 770 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 NR1H3Q13133 447 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 C6orf10Q5SRN2 563 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-202ENST00000358392 TBC1D9BQ66K14 1250 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 KIF2BQ8N4N8 673 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 VPS50Q96JG6 964 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 PNMA6FA0A0J9YX94 578 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 CAV1Q03135 178 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 ARHGAP17Q68EM7 881 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 TTC13Q8NBP0 860 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.82□□□□□ -0.52
COL11A1-202ENST00000358392 ASMTLO95671 621 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 MTMR1Q13613 665 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 SGO1Q5FBB7 561 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 ANKS3Q6ZW76 656 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 HORMAD1Q86X24 394 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 CYFIP2Q96F07 1278 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
COL11A1-202ENST00000358392 TBC1D23Q9NUY8 699 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 AMACRQ9UHK6 382 aa11.82□□□□□ -0.52
COL11A1-202ENST00000358392 NUP160Q12769 1436 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CFAP73A6NFT4 308 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CAPZA2P47755 286 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 DDX53Q86TM3 631 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 RAD18Q9NS91 495 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 H2AFY2Q9P0M6 372 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 IP6K2Q9UHH9 426 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CALB1P05937 261 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SOAT1P35610 550 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 MTM1Q13496 603 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SPATA21Q7Z572 469 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 FGD2Q7Z6J4 655 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 TMEM35BQ8NCS4 154 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CACNA2D2Q9NY47 1150 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SUPT3HB4E1H0 165 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CHN1P15882 459 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM25Q14258 630 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 ATP6V0A4Q9HBG4 840 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 MAP3K15Q6ZN16 1313 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 APOL1O14791 398 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SERPINB3P29508 390 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 VAMP7P51809 220 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 COASYQ13057 564 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 OSBP2Q969R2 916 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CCDC17Q96LX7 622 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 KANSL2Q9H9L4 492 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 RCOR1Q9UKL0 485 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 PAIP2BQ9ULR5 123 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SDC4P31431 198 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 ABCD1P33897 745 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 IL31Q6EBC2 164 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 CDHR1Q96JP9 859 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 NDEL1Q9GZM8 345 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 SERPINB13Q9UIV8 391 aa11.81□□□□□ -0.52
COL11A1-202ENST00000358392 FAM32AQ9Y421 112 aaKnown RBP11.81□□□□□ -0.52
COL11A1-202ENST00000358392 ATP6V1B1P15313 513 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 CRKLP46109 303 aaKnown RBP11.8□□□□□ -0.52
COL11A1-202ENST00000358392 CACNB3P54284 484 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 CDH6P55285 790 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 TRIM69Q86WT6 500 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 MTERF3Q96E29 417 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
COL11A1-202ENST00000358392 ABT1Q9ULW3 272 aaKnown RBP11.8□□□□□ -0.52
COL11A1-202ENST00000358392 A2MP01023 1474 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 PRAMEF22A3QJZ6 481 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 NNMTP40261 264 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 CDK8P49336 464 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 TFDP2Q14188 446 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 CHMP1BQ7LBR1 199 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 PID1Q7Z2X4 250 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 SRLQ86TD4 932 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 IL17REQ8NFR9 667 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 ACAP3Q96P50 834 aa11.8□□□□□ -0.52
COL11A1-202ENST00000358392 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms