RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZSWIM8A7E2V4 1837 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 FLT1P17948 1338 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 GPR25O00155 361 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 FKTNO75072 461 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 USP2O75604 605 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 TSPY3P0CV98 308 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 TSPY8P0CW00 308 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 PRLRP16471 622 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 HALP42357 657 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 EMP3P54852 163 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 DGKZQ13574 1117 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ALX1Q15699 326 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 RTN1Q16799 776 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 CERKLQ49MI3 558 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ANKRD13AQ8IZ07 590 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZSCAN10Q96SZ4 725 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 DYTNA2CJ06 578 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TCP10L2B9ZVM9 353 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 HGSO14964 777 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PLCG2P16885 1265 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 IREB2P48200 963 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CFAP157Q5JU67 520 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZC3H18Q86VM9 953 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 MAP7D3Q8IWC1 876 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 SMYD4Q8IYR2 804 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF444Q8N0Y2 327 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 LRRC47Q8N1G4 583 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 FAM13CQ8NE31 585 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TLCD1Q96CP7 247 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF274Q96GC6 653 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 IFT74Q96LB3 600 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 AGXT2Q9BYV1 514 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 NEUROG2Q9H2A3 272 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 LUC7LQ9NQ29 371 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 VPS54Q9P1Q0 977 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF70Q9UC06 446 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 SERTAD1Q9UHV2 236 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TBC1D30Q9Y2I9 924 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 NAV1Q8NEY1 1877 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF263O14978 683 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 SPTLC1O15269 473 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 ENTPD5O75356 428 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TROVE2P10155 538 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CCNB1P14635 433 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CRKP46108 304 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CDK17Q00537 523 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 GRIN1Q05586 938 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 DPYDQ12882 1025 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 BCL2A1Q16548 175 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CDC42EP5Q6NZY7 148 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 MS4A4AQ96JQ5 239 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CATSPER2Q96P56 530 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 DEFB129Q9H1M3 183 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 CNNM2Q9H8M5 875 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 KCNH4Q9UQ05 1017 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 GREB1LQ9C091 1923 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PPP6R2O75170 966 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 MOCS3O95396 460 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 LDHCP07864 332 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PORP16435 677 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TNNI2P48788 182 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 NR5A1Q13285 461 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 RCN1Q15293 331 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 C12orf60Q5U649 245 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 SPATA24Q86W54 205 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TTC30AQ86WT1 665 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 DDX42Q86XP3 938 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 RIBC1Q8N443 379 aaPredicted RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 MPP4Q96JB8 637 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 PRMT1Q99873 361 aaKnown RBP9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 DPH5Q9H2P9 285 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 IL17RBQ9NRM6 502 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 TAB2Q9NYJ8 693 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
SMARCAL1-202ENST00000358207 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 ASMTLO95671 621 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 LYNP07948 512 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 VAV1P15498 845 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 KRT83P78385 493 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 GSTO1P78417 241 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 CCDC84Q86UT8 332 aaPredicted RBP9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 NAT14Q8WUY8 206 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 SCG3Q8WXD2 468 aaKnown RBP9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 HAUS1Q96CS2 278 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 PRMT6Q96LA8 375 aaPredicted RBP9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 KRT12Q99456 494 aa9.97□□□□□ -0.81
SMARCAL1-202ENST00000358207 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms