RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 PRMT7Q9NVM4 692 aaPredicted RBP10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 CNTNAP5Q8WYK1 1306 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 IGSF9BQ9UPX0 1349 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SNX17Q15036 470 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SGSM1Q2NKQ1 1148 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 ANKEF1Q9NU02 776 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 PPP1R12AO14974 1030 aaPredicted RBP10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 RTN2O75298 545 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 TRIM49P0CI25 452 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 TRIM49CP0CI26 452 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SKIP12755 728 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 REEP2Q9BRK0 252 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SAYSD1Q9NPB0 183 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 KRT38O76015 456 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 CYBBP04839 570 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 ITGA4P13612 1032 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SERPINB6P35237 376 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 CAP2P40123 477 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 ROR1Q01973 937 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 PRAMEF18Q5VWM3 479 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SLC1A1P43005 524 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 ERO1BQ86YB8 467 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 CLEC10AQ8IUN9 316 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 AGAP1Q9UPQ3 857 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 NPHP3-ACAD11A0A0J9YXS1 232 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 MAP3K7O43318 606 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 AP1B1Q10567 949 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 NR1H3Q13133 447 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 SV2CQ496J9 727 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 EPAS1Q99814 870 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
SPTAN1-201ENST00000358161 RGL2O15211 777 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 WDR72Q3MJ13 1102 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 MED15Q96RN5 788 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 DYRK4Q9NR20 520 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 TNS2Q63HR2 1409 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 LCP1P13796 627 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 EPHX2P34913 555 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■■■■□ 24.7
SPTAN1-201ENST00000358161 HSD17B4P51659 736 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 BCAR1P56945 870 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 SLC12A1Q13621 1099 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 KLHL38Q2WGJ6 581 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 C9orf131Q5VYM1 1079 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ANKRD40Q6AI12 368 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ZNF746Q6NUN9 644 aaPredicted RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 GLB1LQ6UWU2 654 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 VPS33BQ9H267 617 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 SNX2O60749 519 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 BAG2O95816 211 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ALDH1A1P00352 501 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 SLC7A5Q01650 507 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 RCN2Q14257 317 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 AGPAT1Q99943 283 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 HEMGNQ9BXL5 484 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 PCSK1NQ9UHG2 260 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 LSM7Q9UK45 103 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ADGRB1O14514 1584 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 NOTUMQ6P988 496 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 DHX35Q9H5Z1 703 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 MAD2L2Q9UI95 211 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ORC6Q9Y5N6 252 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 APOL1O14791 398 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 GSTA4O15217 222 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 CTSHP09668 335 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ACCSLQ4AC99 568 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ATF7IP2Q5U623 682 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ATG4CQ96DT6 458 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 STK33Q9BYT3 514 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 MROH8Q9H579 483 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 MOSPD1Q9UJG1 213 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 PCDHB8Q9UN66 801 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 ACSL3O95573 720 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 CYP2C9P11712 490 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 CHRNA3P32297 505 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 SNRNP35Q16560 246 aaKnown RBP10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
SPTAN1-201ENST00000358161 SLCO1A2P46721 670 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 NCOA4Q13772 614 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 GNASQ5JWF2 1037 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 TTC8Q8TAM2 541 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 C18orf8Q96DM3 657 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 CAPN11Q9UMQ6 739 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 PCDHB7Q9Y5E2 793 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 CCT5P48643 541 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 SKIV2LQ15477 1246 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 PDXDC1Q6P996 788 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 DHX40Q8IX18 779 aaKnown RBP10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 ASIC4Q96FT7 647 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 C17orf75Q9HAS0 396 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 FIS1Q9Y3D6 152 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 AP3B1O00203 1094 aa10.96□□□□□ -0.65
SPTAN1-201ENST00000358161 RHOBTB3O94955 611 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms