RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PCDHGC5Q9Y5F6 944 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SNED1Q8TER0 1413 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 F5H6K3 240 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 GSTA1P08263 222 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 GAP43P17677 238 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 CASP5P51878 434 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 MYL7Q01449 175 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 KLRC3Q07444 240 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 ZC2HC1CQ53FD0 456 aaPredicted RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 SYDE2Q5VT97 1194 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SLC30A10Q6XR72 485 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 ARHGEF18Q6ZSZ5 1173 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 TMEM179Q6ZVK1 233 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 PARVGQ9HBI0 331 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 AIPL1Q9NZN9 384 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 KLHL33A6NCF5 533 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 ARHGAP42A6NI28 874 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 PDXKO00764 312 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 LCA5LO95447 670 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SNHG28P0DPA3 235 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 BMP3P12645 472 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SHMT1P34896 483 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 GRIK3Q13003 919 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 HHIPL2Q6UWX4 724 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 TMC3Q7Z5M5 1100 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 MFN1Q8IWA4 741 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 TEX9Q8N6V9 391 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 RAB3IL1Q8TBN0 382 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 INPP4AQ96PE3 977 aaPredicted RBP10.67□□□□□ -0.7
RNF40-202ENST00000357890 NEUROG2Q9H2A3 272 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 SEMA4AQ9H3S1 761 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 AGAP1Q9UPQ3 857 aa10.67□□□□□ -0.7
RNF40-202ENST00000357890 CFAP69A5D8W1 941 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 MAPK13O15264 365 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 AHCYL1O43865 530 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 NOL4O94818 638 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 KCNJ1P48048 391 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 ROR2Q01974 943 aaKnown RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 ITIH4Q14624 930 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 PPP2R5EQ16537 467 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 CRELD2Q6UXH1 353 aaPredicted RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 DDX50Q9BQ39 737 aaKnown RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 SLITRK6Q9H5Y7 841 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 PARP2Q9UGN5 583 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 GGA2Q9UJY4 613 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 MYO3BQ8WXR4 1341 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 TBX3O15119 743 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 KRT5P13647 590 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 RPA1P27694 616 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 NCALDP61601 193 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 GABPAQ06546 454 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 CRY2Q49AN0 593 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 ERMARDQ5T6L9 678 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 PICK1Q9NRD5 415 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 NYAP2Q9P242 653 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 TAF1P21675 1872 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 K7ENM7 598 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 GYG2O15488 501 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 SMNDC1O75940 238 aaKnown RBP eCLIP10.66□□□□□ -0.7
RNF40-202ENST00000357890 NPR1P16066 1061 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 DESP17661 470 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 CA4P22748 312 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 TPP2P29144 1249 aaPredicted RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 CETN2P41208 172 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 CDR2Q01850 454 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 NFIAQ12857 509 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 DNAJC3Q13217 504 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 C6orf89Q6UWU4 347 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 ISLR2Q6UXK2 745 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 CD302Q8IX05 232 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 NLGN1Q8N2Q7 840 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 RFFLQ8WZ73 363 aa10.66□□□□□ -0.7
RNF40-202ENST00000357890 IQCGQ9H095 443 aaKnown RBP10.66□□□□□ -0.7
RNF40-202ENST00000357890 RASA4BC9J798 803 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 RASA4O43374 803 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 TROVE2P10155 538 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNF40-202ENST00000357890 ETS2P15036 469 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 KCNA1Q09470 495 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 STRN3Q13033 797 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 RCN1Q15293 331 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 TRIM74Q86UV6 250 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 TRIM73Q86UV7 250 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 ALG13Q9NP73 1137 aaKnown RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PASKQ96RG2 1323 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PPIP5K2O43314 1243 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PPP1R11O60927 126 aaPredicted RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 AGTP01019 485 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 HOXA10P31260 410 aaPredicted RBP10.65□□□□□ -0.7
RNF40-202ENST00000357890 SOX5P35711 763 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 SCNN1BP51168 640 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 BLMHQ13867 455 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 MOXD1Q6UVY6 613 aa10.65□□□□□ -0.7
RNF40-202ENST00000357890 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms