RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SPDYE5A6NIY4 337 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 CNGA1P29973 690 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 RPS6KA3P51812 740 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 MTHFD1LQ6UB35 978 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 ARHGEF18Q6ZSZ5 1173 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 CRYGNQ8WXF5 182 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 USP20Q9Y2K6 914 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 FRMPD2Q68DX3 1309 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 ECE2O60344 883 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 RTN3O95197 1032 aaPredicted RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 CETPP11597 493 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 GSTO1P78417 241 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 GRIK5Q16478 980 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 MAPKAPK5Q8IW41 473 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 GDAP1Q8TB36 358 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 TSC22D3Q99576 134 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 OLFML3Q9NRN5 406 aa12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
SMARCAL1-201ENST00000357276 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 IGKV6D-41A0A0C4DH26 115 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 FOXO6A8MYZ6 492 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 KRT18P05783 430 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 CHKAP35790 457 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 RAD23BP54727 409 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 KCNA1Q09470 495 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 TRAF1Q13077 416 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 LMO3Q8TAP4 145 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 APEX2Q9UBZ4 518 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 MPHOSPH10O00566 681 aaKnown RBP12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 ACSL3O95573 720 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 TNFAIP3P21580 790 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 COMTP21964 271 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 RPA1P27694 616 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 STRN3Q13033 797 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 OR52E8Q6IFG1 317 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 MOXD1Q6UVY6 613 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 RELL1Q8IUW5 271 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 ETNPPLQ8TBG4 499 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 AGPAT1Q99943 283 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 JAG2Q9Y219 1238 aa12.97□□□□□ -0.33
SMARCAL1-201ENST00000357276 LRRD1A4D1F6 860 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 GNAT1P11488 350 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ADRA2BP18089 450 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ITIH2P19823 946 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 RFX1P22670 979 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 STX2P32856 288 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 STAT3P40763 770 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 PTDSS1P48651 473 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 SLC18A1P54219 525 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 WDR4P57081 412 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CBWD6Q4V339 395 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CBWD3Q5JTY5 395 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CBWD5Q5RIA9 395 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 SLC17A8Q8NDX2 589 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 EIF3DO15371 548 aaKnown RBP eCLIP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 UPP2O95045 317 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ASMTLO95671 621 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ECEL1O95672 775 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 CHRNB2P17787 502 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 PPP1R21Q6ZMI0 780 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZHX3Q9H4I2 956 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 KCNK9Q9NPC2 374 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 MTMR4Q9NYA4 1195 aa12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.33
SMARCAL1-201ENST00000357276 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 KCNJ1P48048 391 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 CALCOCO2Q13137 446 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 TRIM68Q6AZZ1 485 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 ADGRF4Q8IZF3 695 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 DENND1AQ8TEH3 1009 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 POP1Q99575 1024 aaKnown RBP12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 PITPNM3Q9BZ71 974 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 INTS2Q9H0H0 1204 aaKnown RBP12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 BCAS3Q9H6U6 928 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 DMAC2Q9NW81 257 aa12.96□□□□□ -0.34
SMARCAL1-201ENST00000357276 CPSF2Q9P2I0 782 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms