RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 MAPK7Q13164 816 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 SMAD4Q13485 552 aaKnown RBP18.9■□□□□ 0.62
NCL-202ENST00000356936 PTPAQ15257 358 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 TMEM173Q86WV6 379 aaPredicted RBP18.9■□□□□ 0.62
NCL-202ENST00000356936 COLGALT2Q8IYK4 626 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 SPIRE2Q8WWL2 714 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 ZFP42Q96MM3 310 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 MRPL4Q9BYD3 311 aaKnown RBP18.9■□□□□ 0.62
NCL-202ENST00000356936 CCSER1Q9C0I3 900 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 ZBP1Q9H171 429 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 LARSQ9P2J5 1176 aaKnown RBP18.9■□□□□ 0.62
NCL-202ENST00000356936 ARHGAP28Q9P2N2 729 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 PRKAG3Q9UGI9 489 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 ODF2LQ9ULJ1 636 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 IRAK3Q9Y616 596 aa18.9■□□□□ 0.62
NCL-202ENST00000356936 C2orf71A6NGG8 1288 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 HIDE1A8MVS5 230 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 H0YCG3 227 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 CTSAP10619 480 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 IL9P15248 144 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 TXLNAP40222 546 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 OR1G1P47890 313 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 TMEM184AQ6ZMB5 413 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 FAM178BQ8IXR5 827 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 MSLNLQ96KJ4 702 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 CLEC1BQ9P126 229 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 TNFSF13BQ9Y275 285 aa18.89■□□□□ 0.61
NCL-202ENST00000356936 SRPRBQ9Y5M8 271 aaKnown RBP18.89■□□□□ 0.61
NCL-202ENST00000356936 MORC2Q9Y6X9 1032 aaPredicted RBP18.89■□□□□ 0.61
NCL-202ENST00000356936 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 MBTPS2O43462 519 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 B4GALT3O60512 393 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 GLP2RO95838 553 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 PLCG1P19174 1290 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 SCP2P22307 547 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 RAD51AP2Q09MP3 1159 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 STRN3Q13033 797 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 KARSQ15046 597 aaKnown RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 SMAD2Q15796 467 aaKnown RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 CLUL1Q15846 466 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 NT5DC1Q5TFE4 455 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 BCL7CQ8WUZ0 217 aaPredicted RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 COLEC11Q9BWP8 271 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 MIOSQ9NXC5 875 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 KLK14Q9P0G3 267 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 FBXO2Q9UK22 296 aaPredicted RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 BARX2Q9UMQ3 279 aaPredicted RBP18.88■□□□□ 0.61
NCL-202ENST00000356936 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
NCL-202ENST00000356936 SFI1A8K8P3 1242 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 SLC16A4O15374 487 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 MARCKSP29966 332 aaPredicted RBP18.87■□□□□ 0.61
NCL-202ENST00000356936 CEBPZQ03701 1054 aaKnown RBP18.87■□□□□ 0.61
NCL-202ENST00000356936 GRIN1Q05586 938 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 KCNC3Q14003 757 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 FAM173BQ6P4H8 233 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 GPBP1Q86WP2 473 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 SMRP1Q8NCR6 262 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 GSTCDQ8NEC7 633 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 RAD54LQ92698 747 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 CASP10Q92851 521 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 POP1Q99575 1024 aaKnown RBP18.87■□□□□ 0.61
NCL-202ENST00000356936 ACO2Q99798 780 aaKnown RBP18.87■□□□□ 0.61
NCL-202ENST00000356936 SNTG2Q9NY99 539 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 USP20Q9Y2K6 914 aa18.87■□□□□ 0.61
NCL-202ENST00000356936 PRG3Q9Y2Y8 225 aaPredicted RBP18.87■□□□□ 0.61
NCL-202ENST00000356936 RECQL4O94761 1208 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 EDN1P05305 212 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 KRT18P05783 430 aaKnown RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 THP07101 528 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 HOXB8P17481 243 aaPredicted RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 DDIT3P35638 169 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 SLC39A14Q15043 492 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 ARSHQ5FYA8 562 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 EEF1DP3Q658K8 133 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 LARP4BQ92615 738 aaKnown RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 ZNF396Q96N95 335 aaPredicted RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 EMILIN2Q9BXX0 1053 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 MRPL17Q9NRX2 175 aaKnown RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 TOPORSQ9NS56 1045 aaPredicted RBP18.86■□□□□ 0.61
NCL-202ENST00000356936 BLOC1S4Q9NUP1 217 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 STK17AQ9UEE5 414 aa18.86■□□□□ 0.61
NCL-202ENST00000356936 SOD2P04179 222 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 URODP06132 367 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 SSTR3P32745 418 aaPredicted RBP18.85■□□□□ 0.61
NCL-202ENST00000356936 ABCD1P33897 745 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 YARSP54577 528 aaKnown RBP18.85■□□□□ 0.61
NCL-202ENST00000356936 TUSC3Q13454 348 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
NCL-202ENST00000356936 ANKRD54Q6NXT1 300 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 LLGL2Q6P1M3 1020 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 GJD3Q8N144 294 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
NCL-202ENST00000356936 TMEM161BQ8NDZ6 487 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 VN1R2Q8NFZ6 395 aa18.85■□□□□ 0.61
NCL-202ENST00000356936 EPSTI1Q96J88 318 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms