RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GLT1D1Q96MS3 346 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 DEFB118Q96PH6 123 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 GCOM2Q9BZD3 368 aaPredicted RBP19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 PHF24Q9UPV7 400 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 TNFSF13BQ9Y275 285 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 GYPCP04921 128 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 KRT13P13646 458 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 DARSP14868 501 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 ARF4P18085 180 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 MATR3P43243 847 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 ACOT2P49753 483 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 VAMP7P51809 220 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 CCZ1BP86790 482 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 CCZ1P86791 482 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 RBL2Q08999 1139 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 MPZL3Q6UWV2 235 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 TC2NQ8N9U0 490 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 TMEM40Q8WWA1 233 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 RNF208Q9H0X6 261 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 TMX1Q9H3N1 280 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 ANK1P16157 1881 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 AKR1B15C9JRZ8 316 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 RNF225M0QZC1 329 aaPredicted RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 HARSP12081 509 aaKnown RBP19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 LBX1P52954 281 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 SNX17Q15036 470 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 PTGISQ16647 500 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 SEZ6Q53EL9 994 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 CCDC112Q8NEF3 446 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 KIAA1524Q8TCG1 905 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 CPB2Q96IY4 423 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 TCHPQ9BT92 498 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 PDZD7Q9H5P4 517 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 KIAA1586Q9HCI6 787 aa19.75■□□□□ 0.75
SMARCD3-202ENST00000356800 ZNF233A6NK53 670 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 NRDCO43847 1150 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 TPM1P09493 284 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 SKILP12757 684 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 EIF4BP23588 611 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 FMO5P49326 533 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 WNT7BP56706 349 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 MRPS6P82932 125 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 PTPN11Q06124 597 aaPredicted RBP19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 PPP3CAQ08209 521 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 NOLC1Q14978 699 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 CBWD6Q4V339 395 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 CBWD3Q5JTY5 395 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 CBWD5Q5RIA9 395 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 SLC43A3Q8NBI5 491 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 PARD3BQ8TEW8 1205 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 IQCDQ96DY2 449 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 PANX2Q96RD6 677 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 NUP58Q9BVL2 599 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 TTYH3Q9C0H2 523 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 CDT1Q9H211 546 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 TRMT13Q9NUP7 481 aaKnown RBP19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 OGDHLQ9ULD0 1010 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 PYCARDQ9ULZ3 195 aa19.74■□□□□ 0.75
SMARCD3-202ENST00000356800 KBTBD13C9JR72 458 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 EPHB6O15197 1021 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 ZNF500O60304 480 aaPredicted RBP19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 MFAP3LO75121 409 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 TNFSF9P41273 254 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 FXR1P51114 621 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CRYBB1P53674 252 aaPredicted RBP19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 ZNF568Q3ZCX4 644 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 FIGNQ5HY92 759 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 RPAINQ86UA6 219 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CNGA4Q8IV77 575 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 TMC2Q8TDI7 906 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CPLX3Q8WVH0 158 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 DHX38Q92620 1227 aaKnown RBP19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CCDC127Q96BQ5 260 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CCDC51Q96ER9 411 aa19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 CELF4Q9BZC1 486 aaKnown RBP19.73■□□□□ 0.75
SMARCD3-202ENST00000356800 LRRIQ3A6PVS8 624 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 DNM1LO00429 736 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 OGTO15294 1046 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 ERLIN2O94905 339 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 LDHAP00338 332 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 HOXA11P31270 313 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 CASP14P31944 242 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 ADKP55263 362 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 TMEM132AQ24JP5 1023 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 DPY19L2P1Q6NXN4 242 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 FBXO46Q6PJ61 603 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 ZNF710Q8N1W2 664 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 PCMTD1Q96MG8 357 aaPredicted RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 POP1Q99575 1024 aaKnown RBP19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 MMRN2Q9H8L6 949 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 STARD7Q9NQZ5 370 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 CDY2AQ9Y6F7 541 aa19.72■□□□□ 0.75
SMARCD3-202ENST00000356800 A0A1B0GUA9 196 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 TTC26A0AVF1 554 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 CHRNA1P02708 482 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 HSPA1AP0DMV8 641 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 HSPA1BP0DMV9 641 aaKnown RBP19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 APBA1Q02410 837 aa19.71■□□□□ 0.75
SMARCD3-202ENST00000356800 ENPEPQ07075 957 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms