RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 GABBR1Q9UBS5 961 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 STK24Q9Y6E0 443 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 NSFP46459 744 aaKnown RBP15.01□□□□□ -0.01
SREBF1-202ENST00000355815 TRADDQ15628 312 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 PAPD7Q5XG87 772 aaKnown RBP15.01□□□□□ -0.01
SREBF1-202ENST00000355815 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
SREBF1-202ENST00000355815 C1orf54Q8WWF1 131 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 TTC17Q96AE7 1141 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 PPWD1Q96BP3 646 aaKnown RBP15.01□□□□□ -0.01
SREBF1-202ENST00000355815 TGS1Q96RS0 853 aaKnown RBP15.01□□□□□ -0.01
SREBF1-202ENST00000355815 TLR10Q9BXR5 811 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 STOML1Q9UBI4 398 aa15.01□□□□□ -0.01
SREBF1-202ENST00000355815 FAM107AO95990 144 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FAM153BP0C7A2 387 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FMO5P49326 533 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FAM153CQ494X1 144 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 TMEM154Q6P9G4 183 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 RSAD2Q8WXG1 361 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FGFR1OP2Q9NVK5 253 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 RHBDL2Q9NX52 303 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FAM153AQ9UHL3 310 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 TARSL2A2RTX5 802 aaKnown RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 ANP32DO95626 131 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 ITGA4P13612 1032 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 PIK3CAP42336 1068 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 GLE1Q53GS7 698 aaKnown RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 PPARGC1AQ9UBK2 798 aaKnown RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 TTLL3Q9Y4R7 772 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 COL1A1P02452 1464 aaPredicted RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 LRRC37A3O60309 1634 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FOXN3O00409 490 aaPredicted RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 QARSP47897 775 aaKnown RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 PMS2P54278 862 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 MFAP3P55082 362 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 KCNMA1Q12791 1236 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 DGKZQ13574 1117 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 C10orf76Q5T2E6 689 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FRMD5Q7Z6J6 570 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 SYT2Q8N9I0 419 aaPredicted RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 MRPL46Q9H2W6 279 aaKnown RBP15□□□□□ -0.01
SREBF1-202ENST00000355815 ANAPC7Q9UJX3 599 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 SOX5P35711 763 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 ADCY2Q08462 1091 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 SEZ6Q53EL9 994 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 FAM161BQ96MY7 647 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 CBWD1Q9BRT8 395 aa15□□□□□ -0.01
SREBF1-202ENST00000355815 IGF2BP3O00425 579 aaKnown RBP eCLIP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 POLD1P28340 1107 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SERPINB4P48594 390 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 TFAMQ00059 246 aaKnown RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 BFSP1Q12934 665 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 GRM1Q13255 1194 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 NAB2Q15742 525 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SMAD1Q15797 465 aaKnown RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SAMD7Q7Z3H4 446 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 STAMBPL1Q96FJ0 436 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 GLIS2Q9BZE0 524 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 KCND1Q9NSA2 647 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 NFIBO00712 420 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 KITP10721 976 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 ACOT2P49753 483 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SLMAPQ14BN4 828 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 BBS9Q3SYG4 887 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SNRNP48Q6IEG0 339 aaKnown RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 TRIM59Q8IWR1 403 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SPDYE1Q8NFV5 336 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 PURBQ96QR8 312 aaKnown RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 KLHL11Q9NVR0 708 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 ZNF70Q9UC06 446 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 CNOT8Q9UFF9 292 aaKnown RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SIK3Q9Y2K2 1263 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 GOLGA8MH3BSY2 632 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 CALCAP01258 141 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 MTMR2Q13614 643 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 BAATQ14032 418 aaPredicted RBP14.99□□□□□ -0.01
SREBF1-202ENST00000355815 GADL1Q6ZQY3 521 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 CREG2Q8IUH2 290 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 DNAJC19Q96DA6 116 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 C11orf70Q9BRQ4 267 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 KCNH7Q9NS40 1196 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SALL4Q9UJQ4 1053 aa14.99□□□□□ -0.01
SREBF1-202ENST00000355815 SGK1O00141 431 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 TMEM259Q4ZIN3 620 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 CIAPIN1Q6FI81 312 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 ST13P4Q8IZP2 240 aaPredicted RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 WRNIP1Q96S55 665 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.98□□□□□ -0.011e-8■■■□□ 14.8
SREBF1-202ENST00000355815 RNF146Q9NTX7 359 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 LZTS1Q9Y250 596 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 INO80B-WBP1J3KQ70 363 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 P4HBP07237 508 aaKnown RBP14.98□□□□□ -0.01
SREBF1-202ENST00000355815 INHBAP08476 426 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 HMGCS2P54868 508 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 TNFAIP1Q13829 316 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 HSP90AA5PQ58FG0 334 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 MDH1BQ5I0G3 518 aa14.98□□□□□ -0.01
SREBF1-202ENST00000355815 LGSNQ5TDP6 509 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms