RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 NOLC1Q14978 699 aaKnown RBP eCLIP26.49■■□□□ 1.83
HMGA2-201ENST00000354636 CNKSR3Q6P9H4 555 aa26.49■■□□□ 1.83
HMGA2-201ENST00000354636 ZBTB33Q86T24 672 aa26.49■■□□□ 1.83
HMGA2-201ENST00000354636 ZC3H3Q8IXZ2 948 aaKnown RBP26.49■■□□□ 1.83
HMGA2-201ENST00000354636 ENOX1Q8TC92 643 aaKnown RBP26.49■■□□□ 1.83
HMGA2-201ENST00000354636 EIF2AQ9BY44 585 aaKnown RBP26.49■■□□□ 1.83
HMGA2-201ENST00000354636 PCIF1Q9H4Z3 704 aa26.49■■□□□ 1.83
HMGA2-201ENST00000354636 MCF2P10911 925 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 MATR3P43243 847 aaKnown RBP eCLIP26.48■■□□□ 1.831e-6■■■□□ 16.6
HMGA2-201ENST00000354636 FKBP3Q00688 224 aaKnown RBP26.48■■□□□ 1.83
HMGA2-201ENST00000354636 PPIGQ13427 754 aaKnown RBP eCLIP26.48■■□□□ 1.83
HMGA2-201ENST00000354636 DCAF4L1Q3SXM0 396 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 LINC01599Q8WXQ3 324 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 MSTO1Q9BUK6 570 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 IL23AQ9NPF7 189 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 RGS18Q9NS28 235 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 HSPBP1Q9NZL4 362 aa26.48■■□□□ 1.83
HMGA2-201ENST00000354636 AGO2Q9UKV8 859 aaKnown RBP26.48■■□□□ 1.83
HMGA2-201ENST00000354636 KIAA0391O15091 583 aaKnown RBP26.47■■□□□ 1.83
HMGA2-201ENST00000354636 NR2F2P24468 414 aa26.47■■□□□ 1.83
HMGA2-201ENST00000354636 RPL13P26373 211 aaKnown RBP26.47■■□□□ 1.83
HMGA2-201ENST00000354636 RGS19P49795 217 aa26.47■■□□□ 1.83
HMGA2-201ENST00000354636 TSPYL2Q9H2G4 693 aaPredicted RBP26.47■■□□□ 1.83
HMGA2-201ENST00000354636 OGTO15294 1046 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 FAM189A1O60320 539 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 NPTXRO95502 500 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 ACRP10323 421 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 ADAM9Q13443 819 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 APBB1IPQ7Z5R6 666 aaPredicted RBP26.46■■□□□ 1.83
HMGA2-201ENST00000354636 FAM105AQ9NUU6 356 aa26.46■■□□□ 1.83
HMGA2-201ENST00000354636 HARSP12081 509 aaKnown RBP26.45■■□□□ 1.83
HMGA2-201ENST00000354636 CYP2J2P51589 502 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 SPATA1Q5VX52 437 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 LRRC55Q6ZSA7 311 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 CSGALNACT2Q8N6G5 542 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 XXYLT1Q8NBI6 393 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 ZSWIM2Q8NEG5 633 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 EEF2KMTQ96G04 330 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 FBXL18Q96ME1 805 aa26.45■■□□□ 1.83
HMGA2-201ENST00000354636 TRIM6Q9C030 488 aaPredicted RBP26.45■■□□□ 1.83
HMGA2-201ENST00000354636 A0A0U1RQF3 1178 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 ENPP3O14638 875 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 ZNF623O75123 536 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 LDHAP00338 332 aaKnown RBP26.44■■□□□ 1.82
HMGA2-201ENST00000354636 MYL5Q02045 173 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 IKBKEQ14164 716 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 IQCB1Q15051 598 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 SLC24A5Q71RS6 500 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 C16orf59Q7L2K0 433 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 GPD1LQ8N335 351 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 CEP120Q8N960 986 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 SAAL1Q96ER3 474 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 CBX8Q9HC52 389 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 PCDHB2Q9Y5E7 798 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 C9IYK1 514 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 CETN3O15182 167 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 EXTL3O43909 919 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 RAB27AP51159 221 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 NCAPHQ15003 741 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 CRELD2Q6UXH1 353 aaPredicted RBP26.44■■□□□ 1.82
HMGA2-201ENST00000354636 DHX40Q8IX18 779 aaKnown RBP26.44■■□□□ 1.82
HMGA2-201ENST00000354636 THNSL1Q8IYQ7 743 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 SMG8Q8ND04 991 aaKnown RBP26.44■■□□□ 1.82
HMGA2-201ENST00000354636 SRRTQ9BXP5 876 aaKnown RBP26.44■■□□□ 1.82
HMGA2-201ENST00000354636 C1orf112Q9NSG2 853 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 IPPQ9Y573 584 aa26.44■■□□□ 1.82
HMGA2-201ENST00000354636 GOLGA8IPA6NC78 632 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 GOLGA8JA6NMD2 632 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 IKBKBO14920 756 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 EXOC3O60645 756 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 IBSPP21815 317 aaPredicted RBP26.43■■□□□ 1.82
HMGA2-201ENST00000354636 GRM5P41594 1212 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 CASP4P49662 377 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 FAM189BP81408 668 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 SEZ6Q53EL9 994 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 ZBTB41Q5SVQ8 909 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 AOPEPQ8N6M6 819 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 FAM200AQ8TCP9 573 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 CEP63Q96MT8 703 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 FAM213AQ9BRX8 229 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 NXF3Q9H4D5 531 aaKnown RBP26.43■■□□□ 1.82
HMGA2-201ENST00000354636 KIAA1586Q9HCI6 787 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 NFE2L3Q9Y4A8 694 aa26.43■■□□□ 1.82
HMGA2-201ENST00000354636 ABHD14A-ACY1A0A1B0GW23 586 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.42■■□□□ 1.82
HMGA2-201ENST00000354636 SKIP12755 728 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 ACOT2P49753 483 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 EPHB4P54760 987 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 KYAT1Q16773 422 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 TPD52L1Q16890 204 aaPredicted RBP26.42■■□□□ 1.82
HMGA2-201ENST00000354636 CEP135Q66GS9 1140 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 FILIP1Q7Z7B0 1213 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 MRPL10Q7Z7H8 261 aaKnown RBP26.42■■□□□ 1.82
HMGA2-201ENST00000354636 CPSF3Q9UKF6 684 aaKnown RBP26.42■■□□□ 1.82
HMGA2-201ENST00000354636 HES2Q9Y543 173 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 MICAL3Q7RTP6 2002 aa26.42■■□□□ 1.82
HMGA2-201ENST00000354636 AKAP3O75969 853 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 STAG3L1P0CL83 205 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 ACTN1P12814 892 aa26.41■■□□□ 1.82
HMGA2-201ENST00000354636 TNFSF9P41273 254 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms