RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 ARID2Q68CP9 1835 aa12.73□□□□□ -0.37
CDRT1-202ENST00000354433 CNTNAP2Q9UHC6 1331 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 LAD1O00515 517 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 ITGA4P13612 1032 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 AXLP30530 894 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 HOXA11P31270 313 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 ARL2P36404 184 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 CCT6AP40227 531 aaKnown RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 MBTD1Q05BQ5 628 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 TMEM31Q5JXX7 168 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 AGMOQ6ZNB7 445 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 CNNM3Q8NE01 707 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 CCDC51Q96ER9 411 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 POLR3CQ9BUI4 534 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 EIF2AQ9BY44 585 aaKnown RBP12.72□□□□□ -0.37
CDRT1-202ENST00000354433 RAB34Q9BZG1 259 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 DNAJB4Q9UDY4 337 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 IPPQ9Y573 584 aa12.72□□□□□ -0.37
CDRT1-202ENST00000354433 ALADP13716 330 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 RPA1P27694 616 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 MLH1P40692 756 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 COASYQ13057 564 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 UBXN11Q5T124 520 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-202ENST00000354433 VN1R2Q8NFZ6 395 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 FAM200AQ8TCP9 573 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 IGSF21Q96ID5 467 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 CLIC6Q96NY7 704 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 PPP1R9BQ96SB3 815 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 PANK2Q9BZ23 570 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 CSRNP2Q9H175 543 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 UBN1Q9NPG3 1134 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 KANSL3Q9P2N6 904 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 LRWD1Q9UFC0 647 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 DBR1Q9UK59 544 aaKnown RBP12.71□□□□□ -0.37
CDRT1-202ENST00000354433 KCNH3Q9ULD8 1083 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 USP15Q9Y4E8 981 aaPredicted RBP12.71□□□□□ -0.37
CDRT1-202ENST00000354433 HES2Q9Y543 173 aa12.71□□□□□ -0.37
CDRT1-202ENST00000354433 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 PI4K2BG5E9Z4 385 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 B4GALT5O43286 388 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 EYA4O95677 639 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 GALTP07902 379 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 ARF4P18085 180 aaPredicted RBP12.7□□□□□ -0.38
CDRT1-202ENST00000354433 SLC11A1P49279 550 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDRT1-202ENST00000354433 PTGDRQ13258 359 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 STX1AQ16623 288 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 PYM1Q9BRP8 204 aaKnown RBP12.7□□□□□ -0.38
CDRT1-202ENST00000354433 NFKBIZQ9BYH8 718 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 HOOK1Q9UJC3 728 aaKnown RBP12.7□□□□□ -0.38
CDRT1-202ENST00000354433 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
CDRT1-202ENST00000354433 HCFC2Q9Y5Z7 792 aa12.7□□□□□ -0.38
CDRT1-202ENST00000354433 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 DCXO43602 365 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 NPTXRO95502 500 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 CXCL14O95715 111 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 PRPHP41219 470 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 OR1G1P47890 313 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 POU5F1BQ06416 359 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 ZRSR1Q15695 479 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 KANK3Q6NY19 840 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 KRBA2Q6ZNG9 492 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 SMG8Q8ND04 991 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 CASP10Q92851 521 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 RPGRIP1Q96KN7 1286 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 GAD1Q99259 594 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 ZBP1Q9H171 429 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 BHMT2Q9H2M3 363 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 NXF3Q9H4D5 531 aaKnown RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 PRMT7Q9NVM4 692 aaPredicted RBP12.69□□□□□ -0.38
CDRT1-202ENST00000354433 ANO10Q9NW15 660 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 KIAA1468Q9P260 1216 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 RAPGEFL1Q9UHV5 662 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 KIAA1024Q9UPX6 916 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 B4GALT3O60512 393 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 DDHD2O94830 711 aa12.69□□□□□ -0.38
CDRT1-202ENST00000354433 ALDH2P05091 517 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms