RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
PRPF40A-201ENST00000354363 GSTCDQ8NEC7 633 aa16.04■□□□□ 0.16
PRPF40A-201ENST00000354363 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
PRPF40A-201ENST00000354363 GPRC5CQ9NQ84 441 aa16.04■□□□□ 0.16
PRPF40A-201ENST00000354363 A0A1B0GUA9 196 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 TEX28O15482 410 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 MED24O75448 989 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 ADH1AP07327 375 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 AKAP5P24588 427 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 GLUD2P49448 558 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 SLC27A1Q6PCB7 646 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 C15orf39Q6ZRI6 1047 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 CCDC149Q6ZUS6 474 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 CATSPER3Q86XQ3 398 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 MAN1C1Q9NR34 630 aa16.03■□□□□ 0.16
PRPF40A-201ENST00000354363 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 SEC24BO95487 1268 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 DSG1Q02413 1049 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 MCPH1Q8NEM0 835 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 CMASQ8NFW8 434 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 POLR3CQ9BUI4 534 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 COLEC11Q9BWP8 271 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 VWA8A3KMH1 1905 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 ZMYM2Q9UBW7 1377 aa16.02■□□□□ 0.16
PRPF40A-201ENST00000354363 EIF5BO60841 1220 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 NR1I2O75469 434 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 GLUD1P00367 558 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 GRIK3Q13003 919 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 CDCA2Q69YH5 1023 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 NACC1Q96RE7 527 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 GPR62Q9BZJ7 368 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 CHST7Q9NS84 486 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 KLK14Q9P0G3 267 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 PARP2Q9UGN5 583 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 NUBP1P53384 320 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 ZNF174Q15697 407 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 FAM187BQ17R55 369 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 FUT10Q6P4F1 479 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 C8orf76Q96K31 380 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 B3GALT6Q96L58 329 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 FZD8Q9H461 694 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 FAM86C1Q9NVL1 165 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
PRPF40A-201ENST00000354363 CCDC195A0A1B0GUA6 201 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 OR52Z1P0C646 297 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 MYBP10242 640 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 RPA1P27694 616 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 POTEGQ6S5H5 508 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 TMEM105Q8N8V8 129 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 BSNDQ8WZ55 320 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 RABGGTAQ92696 567 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 RHOBTB2Q9BYZ6 727 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 DPP7Q9UHL4 492 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 ADAM28Q9UKQ2 775 aa16■□□□□ 0.15
PRPF40A-201ENST00000354363 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 RFPL2O75678 378 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 ORC2Q13416 577 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 USP41Q3LFD5 358 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 ELMSAN1Q6PJG2 1045 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 PADI6Q6TGC4 694 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 CYP26C1Q6V0L0 522 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 GPR65Q8IYL9 337 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 ERMNQ8TAM6 284 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 LLPHQ9BRT6 129 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 IRF2BPLQ9H1B7 796 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 C2orf40Q9H1Z8 148 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 FOXP1Q9H334 677 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 PDZD7Q9H5P4 517 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 WDR6Q9NNW5 1121 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 MYH11P35749 1972 aa15.99■□□□□ 0.15
PRPF40A-201ENST00000354363 N4BP3O15049 544 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 N4BP1O75113 896 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 PAPLNO95428 1278 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 C1RP00736 705 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 SPATA31D3P0C874 917 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 CYP11B2P19099 503 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 TDGQ13569 410 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 ASTLQ6HA08 431 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 SPATA31D4Q6ZUB0 917 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 PALB2Q86YC2 1186 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 HDAC7Q8WUI4 952 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 RIN2Q8WYP3 895 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 ZNF707Q96C28 371 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 PAAF1Q9BRP4 392 aa15.98■□□□□ 0.15
PRPF40A-201ENST00000354363 KCNK12Q9HB15 430 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms