RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 UBE4BO95155 1302 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 EXOC1LA0A1B0GW35 172 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 PDLIM1O00151 329 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 CYTH3O43739 400 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 SLC18A1P54219 525 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 MROH7Q68CQ1 1323 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 E9PMD0 336 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 FAM81BQ96LP2 452 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
TRERF1-202ENST00000354325 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 EIF3DO15371 548 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ABHD2P08910 425 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TCEAL1Q15170 157 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SNX30Q5VWJ9 437 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 PDCD7Q8N8D1 485 aaKnown RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TRIM55Q9BYV6 548 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 LRRC19Q9H756 370 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 KANSL2Q9H9L4 492 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 IL17RBQ9NRM6 502 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ASB3Q9Y575 518 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 POTECB2RU33 542 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ABL2P42684 1182 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ATL2Q8NHH9 583 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 MLXIPLQ9NP71 852 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ALAS1P13196 640 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 PHBP35232 272 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 FBXO33Q7Z6M2 555 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 CCDC125Q86Z20 511 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 FAM84BQ96KN1 310 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 MMADHCQ9H3L0 296 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 LNPEPQ9UIQ6 1025 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 MAGEB2O15479 319 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SLC37A4O43826 429 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SORBS3O60504 671 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 CA4P22748 312 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 RFC5P40937 340 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 FMO5P49326 533 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 CENPCQ03188 943 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 ARHGAP44Q17R89 818 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 RGS9BPQ6ZS82 235 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 GSTA5Q7RTV2 222 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SYCP3Q8IZU3 236 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SLC30A5Q8TAD4 765 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 SLC35C1Q96A29 364 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TRIM11Q96F44 468 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 RMDN2Q96LZ7 410 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
TRERF1-202ENST00000354325 PSTPIP2Q9H939 334 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 TMCO1Q9UM00 188 aa13.11□□□□□ -0.31
TRERF1-202ENST00000354325 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ATP9AO75110 1047 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TAC1P20366 129 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 THAP2Q9H0W7 228 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 MYH3P11055 1940 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 LRP5O75197 1615 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ECE2O60344 883 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 GZMAP12544 262 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 SERPINB4P48594 390 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ALKBH8Q96BT7 664 aaKnown RBP13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TBK1Q9UHD2 729 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 COMMD3-BMI1R4GMX3 469 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TTC36A6NLP5 189 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 ADAMTS3O15072 1205 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TBX3O15119 743 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 COMTP21964 271 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 RXRBP28702 533 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 RCN1Q15293 331 aa13.1□□□□□ -0.31
TRERF1-202ENST00000354325 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms