RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PPHLN1Q8NEY8 458 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 STYXQ8WUJ0 223 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ANKS1AQ92625 1134 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 APIPQ96GX9 242 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NELL2Q99435 816 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TTLL2Q9BWV7 592 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CNTD2Q9H8S5 307 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MRPS18AQ9NVS2 196 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 COL20A1Q9P218 1284 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 IGSF9Q9P2J2 1179 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ZC3H7BQ9UGR2 993 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RUVBL1Q9Y265 456 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SCINQ9Y6U3 715 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 A0A087WZ62 844 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 A0A088AWK7 358 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ZC3H12DA2A288 527 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PIK3R2O00459 728 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 OPHN1O60890 802 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TADA3O75528 432 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 FGF18O76093 207 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ZGLP1P0C6A0 271 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 AOAHP28039 575 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SLC7A1P30825 629 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 FLT3LGP49771 235 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 HK2P52789 917 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 EPHA5P54756 1037 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 EXOSC9Q06265 439 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 KCTD2Q14681 263 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NR0B2Q15466 257 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 KHDC1Q4VXA5 237 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CYP2R1Q6VVX0 501 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PCGF5Q86SE9 256 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 DCBLD1Q8N8Z6 715 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NUP43Q8NFH3 380 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 LINC01599Q8WXQ3 324 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 LRRC46Q96FV0 321 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 BARD1Q99728 777 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 AJAP1Q9UKB5 411 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MYPNQ86TC9 1320 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 C9orf172C9J069 976 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 J3KRW8 73 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MYO1FO00160 1098 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 APOL1O14791 398 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 HGSO14964 777 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 AMY1AP04745 511 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 GLI4P10075 376 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 PCSK1P29120 753 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SDHAP31040 664 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 ADCY8P40145 1251 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CACNB3P54284 484 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CD69Q07108 199 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MGAT5Q09328 741 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MAP3K12Q12852 859 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 STARD3Q14849 445 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 KRT72Q14CN4 511 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 NBPF8Q3BBV2 869 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CD276Q5ZPR3 534 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 KIAA1841Q6NSI8 718 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 LIPIQ6XZB0 460 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 RNF111Q6ZNA4 994 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 KANSL1Q7Z3B3 1105 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 HEATR3Q7Z4Q2 680 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TBC1D1Q86TI0 1168 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TMTC1Q8IUR5 882 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CACNA2D3Q8IZS8 1091 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MSL3Q8N5Y2 521 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 IL17REQ8NFR9 667 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 HOXB13Q92826 284 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 YIPF2Q9BWQ6 316 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TRIT1Q9H3H1 467 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SACM1LQ9NTJ5 587 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 DNAI1Q9UI46 699 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 ANAPC4Q9UJX5 808 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TRBV23OR9-2A0A075B6M9 112 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 IGF2BP3O00425 579 aaKnown RBP eCLIP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 PARP1P09874 1014 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 IFIT1P09914 478 aaKnown RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 HNRNPLP14866 589 aaKnown RBP eCLIP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 CAPN3P20807 821 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 FUT4P22083 530 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SLC5A3P53794 718 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SEC24CP53992 1094 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 NKX6-1P78426 367 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SPIDRQ14159 915 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 DOC2BQ14184 412 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 POLD3Q15054 466 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SLC45A4Q5BKX6 768 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 TTC38Q5R3I4 469 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 BICRALQ6AI39 1079 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 RASGRP2Q7LDG7 609 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 ESX1Q8N693 406 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 GIMAP8Q8ND71 665 aaPredicted RBP1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SIMC1Q8NDZ2 872 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 OR14C36Q8NHC7 312 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SHKBP1Q8TBC3 707 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 SAMD11Q96NU1 681 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 MYOCQ99972 504 aa1.96□□□□□ -2.1
BRCA1-202ENST00000354071 NUP62CLQ9H1M0 184 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms