RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ROR1Q01973 937 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 SCN4BQ8IWT1 228 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 LCMT1Q9UIC8 334 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 ARSEP51690 589 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 OCRLQ01968 901 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 ZC3H18Q86VM9 953 aaKnown RBP17.01■□□□□ 0.31
PTPN11-201ENST00000351677 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 CIITAP33076 1130 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 NME3Q13232 169 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 MAD2L2Q9UI95 211 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
PTPN11-201ENST00000351677 BCAR1P56945 870 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 BAATQ14032 418 aaPredicted RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN11-201ENST00000351677 SLC13A1Q9BZW2 595 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 NYAP2Q9P242 653 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 GGPS1O95749 300 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 SKIP12755 728 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 RBM12Q9NTZ6 932 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 SCAF8Q9UPN6 1271 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 AP1B1Q10567 949 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 PIP4K2CQ8TBX8 421 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 DDX56Q9NY93 547 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 SPDYE2BA6NHP3 402 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 SPDYE6P0CI01 402 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 HEATR6Q6AI08 1181 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 EFHD1Q9BUP0 239 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 NVLO15381 856 aaKnown RBP17■□□□□ 0.31
PTPN11-201ENST00000351677 CDH6P55285 790 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 SYCP2LQ5T4T6 812 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 TEX2Q8IWB9 1127 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 KIF12Q96FN5 646 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 TTC1Q99614 292 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 NCAPGQ9BPX3 1015 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 FSD1LQ9BXM9 530 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 ADAM33Q9BZ11 813 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 SMYD3Q9H7B4 428 aa17■□□□□ 0.31
PTPN11-201ENST00000351677 GSTA4O15217 222 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 CHMP6Q96FZ7 201 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 SCOCQ9UIL1 159 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 A8MXQ7 604 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 GRAMD1BQ3KR37 738 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 PLA2G4FQ68DD2 849 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 ANKMY2Q8IV38 441 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 HAUS8Q9BT25 410 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 APOBEC2Q9Y235 224 aaKnown RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 NOP14P78316 857 aaKnown RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 THEM5Q8N1Q8 247 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 VPS39Q96JC1 886 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 SERPINI1Q99574 410 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 SPATA31A1Q5TZJ5 1347 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 FAF1Q9UNN5 650 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 PAMP19021 973 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 IQGAP1P46940 1657 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 STAT5BP51692 787 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 YWHAHQ04917 246 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 PTPAQ15257 358 aa16.99■□□□□ 0.31
PTPN11-201ENST00000351677 PRPF31Q8WWY3 499 aaKnown RBP16.99■□□□□ 0.31
PTPN11-201ENST00000351677 ADAMTS13Q76LX8 1427 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 ZBTB24O43167 697 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 TROAPQ12815 778 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 HABP4Q5JVS0 413 aaKnown RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 LRRC37BQ96QE4 947 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 ABT1Q9ULW3 272 aaKnown RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 KIF19Q2TAC6 998 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 FGD4Q96M96 766 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 TBX3O15119 743 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 CCNI2Q6ZMN8 369 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 CDC26Q8NHZ8 85 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 NOP53Q9NZM5 478 aaKnown RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 PRKCBP05771 671 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 GNAT1P11488 350 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 EN1Q05925 392 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 WDR72Q3MJ13 1102 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
PTPN11-201ENST00000351677 ATP11CQ8NB49 1132 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 FGFR1OP2Q9NVK5 253 aa16.98■□□□□ 0.31
PTPN11-201ENST00000351677 FDX1P10109 184 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 LCP1P13796 627 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 NAB2Q15742 525 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 MAP3K14Q99558 947 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 MRPL46Q9H2W6 279 aaKnown RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 CD44P16070 742 aaKnown RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 TAC1P20366 129 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 COPS2P61201 443 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 HHIPL2Q6UWX4 724 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 RPAINQ86UA6 219 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 NOA1Q8NC60 698 aaKnown RBP16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ECT2Q9H8V3 914 aa16.97■□□□□ 0.31
PTPN11-201ENST00000351677 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms