RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 CLDN3O15551 220 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 PRPF6O94906 941 aaKnown RBP15.26■□□□□ 0.03
SEC13-202ENST00000350697 RHOBTB3O94955 611 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 SMC2O95347 1197 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 MCF2P10911 925 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 PTMSP20962 102 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 GATMP50440 423 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEC13-202ENST00000350697 KCNA1Q09470 495 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 BTG3Q14201 252 aaPredicted RBP15.26■□□□□ 0.03
SEC13-202ENST00000350697 KCNB1Q14721 858 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 NOLC1Q14978 699 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■■■ 27.8
SEC13-202ENST00000350697 CLLU1OSQ5K130 101 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
SEC13-202ENST00000350697 GLIS3Q8NEA6 775 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 ZBTB45Q96K62 511 aaPredicted RBP15.26■□□□□ 0.03
SEC13-202ENST00000350697 TMEM206Q9H813 350 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 RSAD1Q9HA92 442 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 SLC28A3Q9HAS3 691 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 SLC39A2Q9NP94 309 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 HES2Q9Y543 173 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 UBE4BO95155 1302 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEC13-202ENST00000350697 MCL1Q07820 350 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 STK4Q13043 487 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 PAN2Q504Q3 1202 aaKnown RBP15.26■□□□□ 0.03
SEC13-202ENST00000350697 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 GPR153Q6NV75 609 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 GLB1LQ6UWU2 654 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 ZBTB33Q86T24 672 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 FIBCD1Q8N539 461 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 ZNF507Q8TCN5 953 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 HELQQ8TDG4 1101 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 CASD1Q96PB1 797 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 GSDMAQ96QA5 445 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 APOL6Q9BWW8 343 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 GIT1Q9Y2X7 761 aa15.26■□□□□ 0.03
SEC13-202ENST00000350697 ZMYM2Q9UBW7 1377 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 ANKRD63C9JTQ0 380 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 OFD1O75665 1012 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 PPP2R2DQ66LE6 453 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 SLC39A4Q6P5W5 647 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 KIAA0895Q8NCT3 520 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 SCFD1Q8WVM8 642 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 CCDC94Q9BW85 323 aaPredicted RBP15.25■□□□□ 0.03
SEC13-202ENST00000350697 MRPL9Q9BYD2 267 aaKnown RBP15.25■□□□□ 0.03
SEC13-202ENST00000350697 RMND1Q9NWS8 449 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 SNTG2Q9NY99 539 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 PARP2Q9UGN5 583 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 PCDHA5Q9Y5H7 936 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 STYXL1Q9Y6J8 313 aa15.25■□□□□ 0.03
SEC13-202ENST00000350697 ARHGEF15O94989 841 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 HARSP12081 509 aaKnown RBP15.24■□□□□ 0.03
SEC13-202ENST00000350697 AKAP5P24588 427 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 GRM5P41594 1212 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 TAP1Q03518 808 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 NFKBIBQ15653 356 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 NOMO2Q5JPE7 1267 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 THNSL1Q8IYQ7 743 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 LRRC43Q8N309 656 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 CEP120Q8N960 986 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 URGCPQ8TCY9 931 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 HAPLN2Q9GZV7 340 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 INPP5FQ9Y2H2 1132 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 GDAQ9Y2T3 454 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 MYO9BQ13459 2157 aa15.24■□□□□ 0.03
SEC13-202ENST00000350697 CHD9Q3L8U1 2897 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 A0A0B4J269 797 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 ARL5CA6NH57 179 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 TISP43B9A030 160 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 INPPL1O15357 1258 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 RECQL4O94761 1208 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 SLC34A2O95436 690 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 HOXD13P35453 343 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 MLH1P40692 756 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 YARSP54577 528 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 KYAT1Q16773 422 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 CLP1Q92989 425 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 TGS1Q96RS0 853 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 GAD1Q99259 594 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 GTPBP4Q9BZE4 634 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 GBP3Q9H0R5 595 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 IKZF4Q9H2S9 585 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 ZNF576Q9H609 170 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms