RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 SPOPO43791 374 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 WNT7BP56706 349 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 SF3A3Q12874 501 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 MEI1Q5TIA1 1274 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 ZC3H3Q8IXZ2 948 aaKnown RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 HNRNPLLQ8WVV9 542 aaKnown RBP14.98□□□□□ -0.01
TRIM4-201ENST00000349062 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 TXNRD2Q9NNW7 524 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 RNF19AQ9NV58 838 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 USTQ9Y2C2 406 aa14.98□□□□□ -0.01
TRIM4-201ENST00000349062 BRCA2P51587 3418 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GOLGA6CA6NDK9 693 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 SLC26A4O43511 780 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 PPP1R37O75864 691 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GOLGA6DP0CG33 693 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 UBA1P22314 1058 aaKnown RBP14.97□□□□□ -0.01
TRIM4-201ENST00000349062 TCF7P36402 384 aaPredicted RBP14.97□□□□□ -0.01
TRIM4-201ENST00000349062 SLC39A4Q6P5W5 647 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 MAATS1Q7Z4T9 603 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 BCAS4Q8TDM0 211 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GPRASP2Q96D09 838 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 FAM118BQ9BPY3 351 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 MKNK1Q9BUB5 465 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GOLGA6AQ9NYA3 693 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
TRIM4-201ENST00000349062 NR2E1Q9Y466 385 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GOLGA6BA6NDN3 693 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 SMIM23A6NLE4 172 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 JAM2P57087 298 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 NOP9Q86U38 636 aaKnown RBP14.97□□□□□ -0.01
TRIM4-201ENST00000349062 REPS2Q8NFH8 660 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 ZNF653Q96CK0 615 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 KREMEN1Q96MU8 473 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 NT5C1BQ96P26 610 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 MSTO1Q9BUK6 570 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 SPATC1LQ9H0A9 340 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 AZI2Q9H6S1 392 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 PDGFCQ9NRA1 345 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 PTPN22Q9Y2R2 807 aa14.97□□□□□ -0.01
TRIM4-201ENST00000349062 GJB6O95452 261 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 PIK3CAP42336 1068 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 ATP1A2P50993 1020 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 GTF2BQ00403 316 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 IFI16Q16666 785 aaKnown RBP14.96□□□□□ -0.01
TRIM4-201ENST00000349062 HSDL1Q3SXM5 330 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 C1orf220Q5T0J3 134 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 RHPN2Q8IUC4 686 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 FAM76AQ8TAV0 307 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 INO80B-WBP1J3KQ70 363 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 EBAG9O00559 213 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 SUPT20HL2P0C7V6 817 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 STAT5BP51692 787 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 FBXW10Q5XX13 1052 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 KRT39Q6A163 491 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 PARD3BQ8TEW8 1205 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 PCDHB18PQ96TA0 734 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 TRIM51Q9BSJ1 452 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 INO80BQ9C086 356 aaPredicted RBP14.96□□□□□ -0.01
TRIM4-201ENST00000349062 GPR88Q9GZN0 384 aa14.96□□□□□ -0.01
TRIM4-201ENST00000349062 DGAT1O75907 488 aa14.96□□□□□ -0.02
TRIM4-201ENST00000349062 IREB2P48200 963 aaKnown RBP14.96□□□□□ -0.02
TRIM4-201ENST00000349062 ALDH5A1P51649 535 aaPredicted RBP14.96□□□□□ -0.02
TRIM4-201ENST00000349062 ORC1Q13415 861 aa14.96□□□□□ -0.02
TRIM4-201ENST00000349062 OR2W6PQ8NHA6 318 aa14.96□□□□□ -0.02
TRIM4-201ENST00000349062 COG5Q9UP83 839 aa14.96□□□□□ -0.02
TRIM4-201ENST00000349062 ZNF233A6NK53 670 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 KRT14P02533 472 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 KRT19P08727 400 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 ATP4AP20648 1035 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 VPS41P49754 854 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 GRM1Q13255 1194 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 MAP1SQ66K74 1059 aaPredicted RBP14.95□□□□□ -0.02
TRIM4-201ENST00000349062 NIPA1Q7RTP0 329 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 SH2D3CQ8N5H7 860 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 TSEN2Q8NCE0 465 aaKnown RBP14.95□□□□□ -0.02
TRIM4-201ENST00000349062 KRT35Q92764 455 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 KIFAP3Q92845 792 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 TRIM7Q9C029 511 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 ANKEF1Q9NU02 776 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 RAB20Q9NX57 234 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 AGO2Q9UKV8 859 aaKnown RBP14.95□□□□□ -0.02
TRIM4-201ENST00000349062 SOWAHBA6NEL2 793 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 TTI1O43156 1089 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 ERLIN2O94905 339 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 SNX1Q13596 522 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 XKR3Q5GH77 459 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 RNF149Q8NC42 400 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 FBXL13Q8NEE6 735 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 RPGRIP1Q96KN7 1286 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 SPON1Q9HCB6 807 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 MED4Q9NPJ6 270 aa14.95□□□□□ -0.02
TRIM4-201ENST00000349062 ARIH2O95376 493 aa14.94□□□□□ -0.02
TRIM4-201ENST00000349062 OATP04181 439 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms