RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ARHGAP28Q9P2N2 729 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 TNFSF13BQ9Y275 285 aa17.33■□□□□ 0.36
TSPAN4-201ENST00000346501 CHD7Q9P2D1 2997 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 INPPL1O15357 1258 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 PPP6R2O75170 966 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 F13A1P00488 732 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 IRS1P35568 1242 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 STAT6P42226 847 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 SCNN1GP51170 649 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 GRIK3Q13003 919 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 CAMK1Q14012 370 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 ZNF568Q3ZCX4 644 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 SV2BQ7L1I2 683 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 DAW1Q8N136 415 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 MYCT1Q8N699 235 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 EFHBQ8N7U6 833 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 BICD1Q96G01 975 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 COL25A1Q9BXS0 654 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 TOPORSQ9NS56 1045 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
TSPAN4-201ENST00000346501 A0A0C4DFX4 3053 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 MATR3P43243 847 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 SLC11A1P49279 550 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 ERVFC1P60507 584 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 MAPK7Q13164 816 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 ZNF280BQ86YH2 543 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 VPS52Q8N1B4 723 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 KCNG4Q8TDN1 519 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 ZFP42Q96MM3 310 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 CLIC6Q96NY7 704 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 UHRF1Q96T88 793 aaPredicted RBP17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 REEP2Q9BRK0 252 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 LRRC27Q9C0I9 530 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 SNTG2Q9NY99 539 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 KLK14Q9P0G3 267 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 DNAJB4Q9UDY4 337 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 MYO7AQ13402 2215 aa17.31■□□□□ 0.36
TSPAN4-201ENST00000346501 H3BQ06 376 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 NRP1O14786 923 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 FSCN2O14926 492 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 DDHD2O94830 711 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 CXCL14O95715 111 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 THP07101 528 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 KCNQ1P51787 676 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 ADAM15Q13444 863 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 NT5DC1Q5TFE4 455 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 PTCRAQ6ISU1 281 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 FAM178BQ8IXR5 827 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 ACO2Q99798 780 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 GDAQ9Y2T3 454 aa17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 PRG3Q9Y2Y8 225 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-201ENST00000346501 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 K7ENM7 598 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 TRAK2O60296 914 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 CUTAO60888 179 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 RECQL4O94761 1208 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 MCF2P10911 925 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 BMP1P13497 986 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 COL19A1Q14993 1142 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 DUSP6Q16828 381 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 KIAA1841Q6NSI8 718 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 MPZL3Q6UWV2 235 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 ZPBP2Q6X784 338 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 HAUS6Q7Z4H7 955 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 ADGRD2Q7Z7M1 963 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 COLGALT2Q8IYK4 626 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 MRPL43Q8N983 215 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 TMEM161BQ8NDZ6 487 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 TARS2Q9BW92 718 aaKnown RBP17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 EMILIN2Q9BXX0 1053 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
TSPAN4-201ENST00000346501 TRANK1O15050 2925 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 PER2O15055 1255 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 CLDN3O15551 220 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 TOM1L1O75674 476 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 URODP06132 367 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 CTSAP10619 480 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 GRM5P41594 1212 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 ME1P48163 572 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 LIG4P49917 911 aa17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
TSPAN4-201ENST00000346501 AMPD3Q01432 767 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms