RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ORC2Q13416 577 aaPredicted RBP13.75□□□□□ -0.21
SGCA-202ENST00000344627 NBR1Q14596 966 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 RABEP1Q15276 862 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
SGCA-202ENST00000344627 POTEGQ6S5H5 508 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 TMEM173Q86WV6 379 aaPredicted RBP13.75□□□□□ -0.21
SGCA-202ENST00000344627 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 KLHL5Q96PQ7 755 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
SGCA-202ENST00000344627 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 GIT1Q9Y2X7 761 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 KIF3AQ9Y496 699 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 HES2Q9Y543 173 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 IPPQ9Y573 584 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 TRIOO75962 3097 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 NRP1O14786 923 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 LILRB3O75022 631 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 DDHD2O94830 711 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 PAPLNO95428 1278 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 NPTXRO95502 500 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 RPA1P27694 616 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 OR1G1P47890 313 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 AFF1P51825 1210 aaKnown RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 CDR2LQ86X02 465 aaPredicted RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 ZBTB8OSQ8IWT0 167 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 SMG8Q8ND04 991 aaKnown RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
SGCA-202ENST00000344627 RPS6KC1Q96S38 1066 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 GAD1Q99259 594 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 COLEC11Q9BWP8 271 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 MFSD1Q9H3U5 465 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 PLEKHA4Q9H4M7 779 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 PARP2Q9UGN5 583 aa13.74□□□□□ -0.21
SGCA-202ENST00000344627 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 B4GALT5O43286 388 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 BRD1O95696 1058 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 EPCAMP16422 314 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
SGCA-202ENST00000344627 SP100P23497 879 aaPredicted RBP13.73□□□□□ -0.21
SGCA-202ENST00000344627 MLH1P40692 756 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 TRAPPC10P48553 1259 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 TDGQ13569 410 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 PADI6Q6TGC4 694 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 BCL7CQ8WUZ0 217 aaPredicted RBP13.73□□□□□ -0.21
SGCA-202ENST00000344627 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 RTP3Q9BQQ7 232 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 RAB34Q9BZG1 259 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 PRG3Q9Y2Y8 225 aaPredicted RBP13.73□□□□□ -0.21
SGCA-202ENST00000344627 WDFY4Q6ZS81 3184 aa13.73□□□□□ -0.21
SGCA-202ENST00000344627 H3BQV1 296 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 C2CD2LO14523 706 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 B4GALT3O60512 393 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 GLUD1P00367 558 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 CNPP09543 421 aaKnown RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 AKAP5P24588 427 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 SCNN1GP51170 649 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 FOXK2Q01167 660 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 PTGDRQ13258 359 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 AMHR2Q16671 573 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 RNF168Q8IYW5 571 aaPredicted RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 C12orf76Q8N812 135 aaPredicted RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 POLD4Q9HCU8 107 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 ZDHHC7Q9NXF8 308 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 FNIP2Q9P278 1114 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 LIMD1Q9UGP4 676 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 DUSP12Q9UNI6 340 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 PCDHB6Q9Y5E3 794 aa13.72□□□□□ -0.21
SGCA-202ENST00000344627 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
SGCA-202ENST00000344627 GFRA3O60609 400 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 CYP11B2P19099 503 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
SGCA-202ENST00000344627 NBL1P41271 181 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 GLUD2P49448 558 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
SGCA-202ENST00000344627 DSG1Q02413 1049 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 DSC1Q08554 894 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
SGCA-202ENST00000344627 MAPK6Q16659 721 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 TMC5Q6UXY8 1006 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 C4orf32Q8N8J7 132 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
SGCA-202ENST00000344627 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms