RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 SEL1LQ9UBV2 794 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 DBR1Q9UK59 544 aaKnown RBP14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 ODF2LQ9ULJ1 636 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 COL4A3BPQ9Y5P4 624 aa14.8□□□□□ -0.04
HERPUD1-202ENST00000344114 ITIH6Q6UXX5 1313 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 USP34Q70CQ2 3546 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 NPHP3-ACAD11A0A0J9YXS1 232 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 TMEM221A6NGB7 291 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 LOC730098B7Z3J9 87 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 M0R296 226 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 TPM2P07951 284 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 KCNA2P16389 499 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 DNAJB1P25685 340 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 PBX1P40424 430 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 QARSP47897 775 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 NDUFV1P49821 464 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 FBXO47Q5MNV8 452 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 IER5LQ5T953 404 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 SPECC1LQ69YQ0 1117 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 ANKRD40Q6AI12 368 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 ADGRD2Q7Z7M1 963 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 SMAP1Q8IYB5 467 aaPredicted RBP14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 CMTR2Q8IYT2 770 aaKnown RBP14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 EFHBQ8N7U6 833 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 PIGOQ8TEQ8 1089 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 LINC01599Q8WXQ3 324 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 PPP2R3CQ969Q6 453 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 RUSC1Q9BVN2 902 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 OLFML3Q9NRN5 406 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 SAMM50Q9Y512 469 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 EVPLQ92817 2033 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 UBE4BO95155 1302 aa14.79□□□□□ -0.04
HERPUD1-202ENST00000344114 MBLAC1A4D2B0 266 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 ARHGEF35A5YM69 484 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 N4BP3O15049 544 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 DKC1O60832 514 aaKnown RBP eCLIP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 FAM13AO94988 1023 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 ITGB1P05556 798 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 ZXDAP98168 799 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 TCF15Q12870 199 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 LRMPQ12912 555 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 TBX2Q13207 712 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 C1orf186Q6ZWK4 172 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 RSPH3Q86UC2 560 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 SFR1Q86XK3 245 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 CCDC112Q8NEF3 446 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 KIAA1524Q8TCG1 905 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 SPPL3Q8TCT6 385 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 PBXIP1Q96AQ6 731 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 CNOT6LQ96LI5 555 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 ZHX3Q9H4I2 956 aa14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 WRAP73Q9P2S5 460 aaPredicted RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
HERPUD1-202ENST00000344114 FNDC1Q4ZHG4 1894 aaPredicted RBP14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 LGALS16A8MUM7 142 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 EIF3DO15371 548 aaKnown RBP eCLIP14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 ATP9AO75110 1047 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 CSPG5O95196 566 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 GLP2RO95838 553 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 GUCY2CP25092 1073 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 TCF7P36402 384 aaPredicted RBP14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 PSMC5P62195 406 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 CCZ1BP86790 482 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 CCZ1P86791 482 aaPredicted RBP14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 RAD51AP2Q09MP3 1159 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 TRIM14Q14142 442 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 ZCWPW2Q504Y3 356 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 ARMCX5Q6P1M9 558 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 TIPINQ9BVW5 301 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 AGO3Q9H9G7 860 aaKnown RBP14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 TAB2Q9NYJ8 693 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 PYCARDQ9ULZ3 195 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 CDY2AQ9Y6F7 541 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 SQORQ9Y6N5 450 aa14.77□□□□□ -0.04
HERPUD1-202ENST00000344114 TEX33O43247 280 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 CCNE2O96020 404 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 ZNF131P52739 623 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 SP4Q02446 784 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 GRIK4Q16099 956 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 BMT2Q1RMZ1 405 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 EDRF1Q3B7T1 1238 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 RTN4RL1Q86UN2 441 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 NPAS4Q8IUM7 802 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 FBXL6Q8N531 539 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 KLHL23Q8NBE8 558 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 POF1BQ8WVV4 589 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 DNAJB3Q8WWF6 145 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 CEP63Q96MT8 703 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 CCDC43Q96MW1 224 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 FTHL17Q9BXU8 183 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 PARVGQ9HBI0 331 aa14.76□□□□□ -0.05
HERPUD1-202ENST00000344114 JPH1Q9HDC5 661 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms