RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ARHGAP32A7KAX9 2087 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 DOCK3Q8IZD9 2030 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 SAGE2PA6NJ88 616 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 GGPS1O95749 300 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 COPAP53621 1224 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 ITGA1P56199 1179 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 MYL7Q01449 175 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 TSNQ15631 228 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 IMPG1Q17R60 797 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 BHMT2Q9H2M3 363 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 C19orf44Q9H6X5 657 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 RPRD1BQ9NQG5 326 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 CYP26B1Q9NR63 512 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 SMARCAL1Q9NZC9 954 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 DNMT1P26358 1616 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 PARD3Q8TEW0 1356 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 PLEKHG2Q9H7P9 1386 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.5□□□□□ -1.37
VCAN-203ENST00000343200 RNF113AO15541 343 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 CMA1P23946 247 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 S100A12P80511 92 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 C15orf59Q2T9L4 293 aaPredicted RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 ERICH5Q6P6B1 374 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 CHST3Q7LGC8 479 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 MYD88Q99836 296 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 HINFPQ9BQA5 517 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 H2AFYO75367 372 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 HSF2Q03933 536 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 STX5Q13190 355 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 BYSLQ13895 437 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 PRR23BQ6ZRT6 265 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 KRT25Q7Z3Z0 450 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 S100ZQ8WXG8 99 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 DGCR14Q96DF8 476 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 ACAP3Q96P50 834 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 NAV1Q8NEY1 1877 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 CLASP1Q7Z460 1538 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 GUCA1CO95843 209 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 ANK1P16157 1881 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 POLR3EQ9NVU0 708 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 RABL2AQ9UBK7 228 aaPredicted RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 TELO2Q9Y4R8 837 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 C1orf232A0A0U1RR37 186 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 TSPAN4O14817 238 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 SLC27A2O14975 620 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 CTIFO43310 598 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 GTPBP6O43824 516 aaPredicted RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 NOS1APO75052 506 aaPredicted RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 KRT36O76013 467 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 USP1O94782 785 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 AGTP01019 485 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 ALOX5P09917 674 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 CD19P15391 556 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 WARSP23381 471 aaKnown RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
VCAN-203ENST00000343200 KRT31Q15323 416 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 AOC3Q16853 763 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 PLEKHA8Q96JA3 519 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 ZFP42Q96MM3 310 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 EPC1Q9H2F5 836 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 UBN1Q9NPG3 1134 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 WDR37Q9Y2I8 494 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 MAST3O60307 1309 aa6.5□□□□□ -1.37
VCAN-203ENST00000343200 F6X3S4 739 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ACLYP53396 1101 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RPS6P62753 249 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 TSTA3Q13630 321 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 DHX34Q14147 1143 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 FAAH2Q6GMR7 532 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RFX8Q6ZV50 586 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 PEX5LQ8IYB4 626 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MAGEB6Q8N7X4 407 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CDYLQ9Y232 598 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SYNCRIPO60506 623 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 RAPGEF3O95398 923 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CCDC130P13994 396 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MSH3P20585 1137 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MESDQ14696 234 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 TMEM110Q86TL2 294 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RFX6Q8HWS3 928 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RHOT2Q8IXI1 618 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ERP27Q96DN0 273 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 RMND5BQ96G75 393 aaPredicted RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 TEX13BQ9BXU2 312 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 EHD1Q9H4M9 534 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 C15orf41Q9Y2V0 281 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 SHANK1Q9Y566 2161 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 A0A0G2JPF8 293 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 HNRNPCL3B7ZW38 293 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 STMND1H3BQB6 276 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 GRM8O00222 908 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 HNRNPCL4P0DMR1 293 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 ATP4AP20648 1035 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 STARP49675 285 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MAPK11Q15759 364 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 DGUOKQ16854 277 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 MRPL48Q96GC5 212 aaKnown RBP6.49□□□□□ -1.37
VCAN-203ENST00000343200 FSD1LQ9BXM9 530 aa6.49□□□□□ -1.37
VCAN-203ENST00000343200 CYLDQ9NQC7 956 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms