RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MAPK13O15264 365 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ATMINO43313 823 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 PHF2O75151 1096 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 AGTP01019 485 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 GLI1P08151 1106 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 SREBF1P36956 1147 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 EVX2Q03828 476 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 PPP2R5CQ13362 524 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 KYNUQ16719 465 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 XKR3Q5GH77 459 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 TRIM72Q6ZMU5 477 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 SPATA24Q86W54 205 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 FAM163AQ96GL9 167 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 SNF8Q96H20 258 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 THAP2Q9H0W7 228 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 SLC9A2Q9UBY0 812 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 WDR46O15213 610 aaKnown RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 XPOTO43592 962 aaKnown RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 KLRC4O43908 158 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 CNGA1P29973 690 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 GCKP35557 465 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 PSMC1P62191 440 aaKnown RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 FAM47CQ5HY64 1035 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 DNAAF5Q86Y56 855 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 XPO6Q96QU8 1125 aaKnown RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 A0A0G2JND7 137 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 IL1R1P14778 569 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 HSD17B3P37058 310 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 ZNF568Q3ZCX4 644 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 TTC17Q96AE7 1141 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 PRMT6Q96LA8 375 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 MTRQ99707 1265 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 GTF3C4Q9UKN8 822 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 P4HA2O15460 535 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 CDH16O75309 829 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 IRX4P78413 519 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 MYO1EQ12965 1108 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 PDIA2Q13087 525 aaKnown RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 ZBED8Q8IZ13 594 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 AFAP1L2Q8N4X5 818 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 LPAR1Q92633 364 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 RPAP3Q9H6T3 665 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 JPH1Q9HDC5 661 aaPredicted RBP7.66□□□□□ -1.18
VCAN-202ENST00000342785 STRIP2Q9ULQ0 834 aa7.66□□□□□ -1.18
VCAN-202ENST00000342785 UBE4BO95155 1302 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 IQANK1A0A1B0GTG1 560 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 ZSCAN5CA6NGD5 496 aaPredicted RBP7.65□□□□□ -1.18
VCAN-202ENST00000342785 MYBL1P10243 752 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SHMT1P34896 483 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 GRIK5Q16478 980 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 LRRC31Q6UY01 552 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 DNAAF3Q8N9W5 541 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 CYP2W1Q8TAV3 490 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 NLRP7Q8WX94 980 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 CPA5Q8WXQ8 436 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 HSPH1Q92598 858 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 TTC25Q96NG3 672 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 TIPINQ9BVW5 301 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 ZNRF3Q9ULT6 936 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 PCDHB2Q9Y5E7 798 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 ESRRAP11474 423 aaPredicted RBP7.65□□□□□ -1.18
VCAN-202ENST00000342785 SLC29A2Q14542 456 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 PCGF5Q86SE9 256 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 ZNF507Q8TCN5 953 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SLC35C1Q96A29 364 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SLC38A10Q9HBR0 1119 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SLC5A4Q9NY91 659 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 IP6K2Q9UHH9 426 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 RIMBP3CA6NJZ7 1639 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 RIMBP3BA6NNM3 1639 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 RIMBP3Q9UFD9 1639 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 GIPC1O14908 333 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 FAM107AO95990 144 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SSTR3P32745 418 aaPredicted RBP7.65□□□□□ -1.18
VCAN-202ENST00000342785 SLC1A1P43005 524 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 DUOXA2Q1HG44 320 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 FBXW10Q5XX13 1052 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 DPY19L2Q6NUT2 758 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 NSMCE1Q8WV22 266 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 TMEM143Q96AN5 459 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 RBM15Q96T37 977 aaKnown RBP eCLIP7.65□□□□□ -1.18
VCAN-202ENST00000342785 TEX13BQ9BXU2 312 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 TMEM39BQ9GZU3 492 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 LRRC4Q9HBW1 653 aa7.65□□□□□ -1.18
VCAN-202ENST00000342785 SCAF8Q9UPN6 1271 aaKnown RBP7.65□□□□□ -1.18
VCAN-202ENST00000342785 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 KRT7P08729 469 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 CHN1P15882 459 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 RPS6P62753 249 aaKnown RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 MTMR2Q13614 643 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 TGS1Q96RS0 853 aaKnown RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 ADAM33Q9BZ11 813 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 FAM49AQ9H0Q0 323 aaPredicted RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 HEY1Q9Y5J3 304 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 PDE2AO00408 941 aaPredicted RBP7.65□□□□□ -1.19
VCAN-202ENST00000342785 ARP10275 920 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 ITIH2P19823 946 aa7.65□□□□□ -1.19
VCAN-202ENST00000342785 IFRD2Q12894 506 aaPredicted RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms