RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GSC2O15499 205 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 CAV1Q03135 178 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 TMEM62Q0P6H9 643 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 UBAP2Q5T6F2 1119 aaKnown RBP19.77■□□□□ 0.76
SMPD1-201ENST00000342245 FYB2Q5VWT5 728 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 RFWD3Q6PCD5 774 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 KRT25Q7Z3Z0 450 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 PRELID2Q8N945 189 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 SLC35G2Q8TBE7 412 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 MCUR1Q96AQ8 359 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 PICK1Q9NRD5 415 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 BLOC1S4Q9NUP1 217 aa19.77■□□□□ 0.76
SMPD1-201ENST00000342245 ASMTLO95671 621 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 PLCG2P16885 1265 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 ZNF24P17028 368 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 CRABP2P29373 138 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 IGHMBP2P38935 993 aaKnown RBP19.77■□□□□ 0.75
SMPD1-201ENST00000342245 PSMD7P51665 324 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 KCNH2Q12809 1159 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 DSTYKQ6XUX3 929 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 CCDC25Q86WR0 208 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 ZBTB38Q8NAP3 1195 aaPredicted RBP19.77■□□□□ 0.75
SMPD1-201ENST00000342245 TIMMDC1Q9NPL8 285 aa19.77■□□□□ 0.75
SMPD1-201ENST00000342245 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 GJA8P48165 433 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 PDK4Q16654 411 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 ACAD11Q709F0 780 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 U2AF1L4Q8WU68 220 aaKnown RBP19.76■□□□□ 0.75
SMPD1-201ENST00000342245 C17orf50Q8WW18 174 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 MIPEPQ99797 713 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 TYW1Q9NV66 732 aaKnown RBP19.76■□□□□ 0.75
SMPD1-201ENST00000342245 CHMP2BQ9UQN3 213 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
SMPD1-201ENST00000342245 A0A0J9YVX5 310 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 GYG2O15488 501 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 ACSL3O95573 720 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 ITIH2P19823 946 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 TBC1D9BQ66K14 1250 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 DYMQ7RTS9 669 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 ADAT2Q7Z6V5 191 aaKnown RBP19.76■□□□□ 0.75
SMPD1-201ENST00000342245 CLNKQ7Z7G1 428 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 RASGRP4Q8TDF6 673 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 RAD54LQ92698 747 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 ECSITQ9BQ95 431 aa19.76■□□□□ 0.75
SMPD1-201ENST00000342245 FAM196BA6NMK8 535 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 PRPF4O43172 522 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SLC5A1P13866 664 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 COPB2P35606 906 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 CCNFP41002 786 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 HADHBP55084 474 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 GRB10Q13322 594 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 CYLC2Q14093 348 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 STAT4Q14765 748 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 EDRF1Q3B7T1 1238 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 NLRP9Q7RTR0 991 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 VPS52Q8N1B4 723 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 RAB34Q9BZG1 259 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 RANBP17Q9H2T7 1088 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 HNRNPCP07910 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SPATA31D3P0C874 917 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 COILP38432 576 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 TECP42680 631 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 RPL26P61254 145 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 CCDC92Q53HC0 331 aaPredicted RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SEL1L2Q5TEA6 688 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 DPY19L2P1Q6NXN4 242 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SPATA31D4Q6ZUB0 917 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SRRM1Q8IYB3 904 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 CCDC105Q8IYK2 499 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 DGCR14Q96DF8 476 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 TBCCD1Q9NVR7 557 aa19.75■□□□□ 0.75
SMPD1-201ENST00000342245 SMG5Q9UPR3 1016 aaKnown RBP19.75■□□□□ 0.75
SMPD1-201ENST00000342245 EXOC3O60645 756 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 CPA3P15088 417 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 JAM2P57087 298 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 MAP3K10Q02779 954 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 DNAJC3Q13217 504 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 EXOC3L4Q17RC7 722 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 CTC1Q2NKJ3 1217 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 FRMD5Q7Z6J6 570 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 DDX12PQ92771 950 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 SLCO2A1Q92959 643 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 NSL1Q96IY1 281 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 MPP4Q96JB8 637 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 BRIP1Q9BX63 1249 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 BARX2Q9UMQ3 279 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 SSX2IPQ9Y2D8 614 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 MROH5Q6ZUA9 1318 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 A0A1W2PRG0 241 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 BIRC5O15392 142 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 STRNO43815 780 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 TROVE2P10155 538 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 FGFR2P21802 821 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 SERPINB3P29508 390 aa19.74■□□□□ 0.75
SMPD1-201ENST00000342245 WDR4P57081 412 aaKnown RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 HNRNPDQ14103 355 aaKnown RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 C12orf50Q8NA57 414 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-201ENST00000342245 SLC30A5Q8TAD4 765 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms