RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 CLMNQ96JQ2 1002 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 AP4S1Q9Y587 144 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 USP1O94782 785 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 UBXN2AP68543 259 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 C1orf131Q8NDD1 294 aaKnown RBP13.53□□□□□ -0.24
USP47-202ENST00000339865 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 ZBED6P86452 979 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 SLFN12LQ6IEE8 588 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 ASNA1O43681 348 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 MAPKAPK2P49137 400 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 AKR1D1P51857 326 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 HEATR6Q6AI08 1181 aaKnown RBP13.53□□□□□ -0.24
USP47-202ENST00000339865 STKLD1Q8NE28 680 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 RBM41Q96IZ5 413 aaKnown RBP13.53□□□□□ -0.24
USP47-202ENST00000339865 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 EPN3Q9H201 632 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
USP47-202ENST00000339865 PDE8AO60658 829 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 FGFR4P22455 802 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 MARK3P27448 753 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 TALDO1P37837 337 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 POTEAQ6S8J7 498 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 KDELC2Q7Z4H8 507 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 CEP170P1Q96L14 293 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 HSPA2P54652 639 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 PTPN23Q9H3S7 1636 aa13.52□□□□□ -0.24
USP47-202ENST00000339865 ATP1A4Q13733 1029 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 AASDHQ4L235 1098 aaPredicted RBP13.52□□□□□ -0.25
USP47-202ENST00000339865 SPATA21Q7Z572 469 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 ZNF197O14709 1029 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 SCRN1Q12765 414 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 ARMC3Q5W041 872 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 NANOGNBQ7Z5D8 188 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 GAS2L3Q86XJ1 694 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 HS6ST3Q8IZP7 471 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 AFG1LQ8WV93 481 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 CMTM5Q96DZ9 223 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 DIS3Q9Y2L1 958 aaKnown RBP13.52□□□□□ -0.25
USP47-202ENST00000339865 MAP3K1Q13233 1512 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 TRIM43BA6NCK2 446 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 PFKFB2O60825 505 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 MLNP12872 115 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 SOAT1P35610 550 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 AP1S2P56377 157 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 SLC10A5Q5PT55 438 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.52□□□□□ -0.25
USP47-202ENST00000339865 DGKIO75912 1065 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 MAPK11Q15759 364 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 DNAL1Q4LDG9 190 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 WLSQ5T9L3 541 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 DDI2Q5TDH0 399 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 TOGARAM2Q6ZUX3 1019 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 PRPF39Q86UA1 669 aaKnown RBP13.52□□□□□ -0.25
USP47-202ENST00000339865 SEC16BQ96JE7 1060 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 AS3MTQ9HBK9 375 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 ADAM22Q9P0K1 906 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 CITO14578 2027 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
USP47-202ENST00000339865 ESYT3A0FGR9 886 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 FOSP01100 380 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 ZCCHC18P0CG32 403 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 DSG1Q02413 1049 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 NME3Q13232 169 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 IZUMO1Q8IYV9 350 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 KIF2BQ8N4N8 673 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 SMARCA4P51532 1647 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 CLASP2O75122 1294 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 MYL3P08590 195 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 KPNB1Q14974 876 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 ARMC4Q5T2S8 1044 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 DSTYKQ6XUX3 929 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 DGKHQ86XP1 1220 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 RAB42Q8N4Z0 105 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 VIPAS39Q9H9C1 493 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 CCND1P24385 295 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ADAM33Q9BZ11 813 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 SP110Q9HB58 689 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 CSNK2BP67870 215 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 NMD3Q96D46 503 aaKnown RBP13.51□□□□□ -0.25
USP47-202ENST00000339865 PGBD4Q96DM1 585 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 TINF2Q9BSI4 451 aa13.51□□□□□ -0.25
USP47-202ENST00000339865 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms