RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CCDC65Q8IXS2 484 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SPOCK2Q92563 424 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DHX36Q9H2U1 1008 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 TAS2R14Q9NYV8 317 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 ATXN10Q9UBB4 475 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 LNPEPQ9UIQ6 1025 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 MTMR7Q9Y216 660 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 FAM170AA1A519 330 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 ASMTLO95671 621 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 PENKP01210 267 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CHRNB2P17787 502 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 STAT1P42224 750 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 MAGEA8P43361 318 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 MCL1Q07820 350 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DNAJC3Q13217 504 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 RCN1Q15293 331 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SIX1Q15475 284 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CERKLQ49MI3 558 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 ZC3H18Q86VM9 953 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SRRM1Q8IYB3 904 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CCDC105Q8IYK2 499 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 C8orf37Q96NL8 207 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 GBP5Q96PP8 586 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 PLEKHG4BQ96PX9 1271 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 CADM1Q9BY67 442 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
NECAP1-201ENST00000339754 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 NUMBLQ9Y6R0 609 aa10.06□□□□□ -0.8
NECAP1-201ENST00000339754 E9PMD0 336 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 KCNQ2O43526 872 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 TBX10O75333 385 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 AKAP3O75969 853 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 KRT36O76013 467 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 GGPS1O95749 300 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 PYGMP11217 842 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 HOXD13P35453 343 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SOX5P35711 763 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SCNN1BP51168 640 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 CASP5P51878 434 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 CCDC6Q16204 474 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 FAM98CQ17RN3 349 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 CTC1Q2NKJ3 1217 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 TAF1BQ53T94 588 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ACSBG2Q5FVE4 666 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 LRRC74BQ6ZQY2 392 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 MIGA2Q7L4E1 593 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ZNF34Q8IZ26 560 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 DENND1AQ8TEH3 1009 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 NSUN4Q96CB9 384 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 LZTS2Q9BRK4 669 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SPATA16Q9BXB7 569 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SPZ1Q9BXG8 430 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 EURLQ9NYK6 297 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ARPP21Q9UBL0 812 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 TBK1Q9UHD2 729 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ACTL7BQ9Y614 415 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SLC4A7Q9Y6M7 1214 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SLIT2O94813 1529 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 LAMB1P07942 1786 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 PASKQ96RG2 1323 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 FAM196BA6NMK8 535 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 MIF4GDA9UHW6 222 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 USP17L8P0C7I0 530 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 HADHBP55084 474 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 AP1B1Q10567 949 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 WDR72Q3MJ13 1102 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 RGS9BPQ6ZS82 235 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 EPM2AIP1Q7L775 607 aaPredicted RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 PALB2Q86YC2 1186 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 KBTBD2Q8IY47 623 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 REXO1Q8N1G1 1221 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ARHGAP18Q8N392 663 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 SLC35C1Q96A29 364 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 TMEM47Q9BQJ4 181 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
NECAP1-201ENST00000339754 PREBQ9HCU5 417 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 CYLDQ9NQC7 956 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 KRT82Q9NSB4 513 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 WHRNQ9P202 907 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 KIAA1551Q9HCM1 1747 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 NUP98P52948 1817 aa10.05□□□□□ -0.8
NECAP1-201ENST00000339754 ANKRD62A6NC57 917 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms