RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ASLP04424 464 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 HOXD8P13378 290 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-202ENST00000339438 KLRC3Q07444 240 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 ACVR2BQ13705 512 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 TYW1BQ6NUM6 668 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 CRIPAKQ8N1N5 446 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 STAG2Q8N3U4 1231 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 GBP7Q8N8V2 638 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-202ENST00000339438 LRRC45Q96CN5 670 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 DHTKD1Q96HY7 919 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-202ENST00000339438 TUBGCP2Q9BSJ2 902 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 MYL10Q9BUA6 226 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 DENND2DQ9H6A0 471 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-202ENST00000339438 INCENPQ9NQS7 918 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 ETNK2Q9NVF9 386 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 CIDEBQ9UHD4 219 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 LRCH1Q9Y2L9 728 aa6.02□□□□□ -1.45
CSDE1-202ENST00000339438 RPTORQ8N122 1335 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 A0A0J9YVX5 310 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DAPK3O43293 454 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 GTPBP6O43824 516 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 CYP11B2P19099 503 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 GRIA2P42262 883 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 CACNA2D1P54289 1103 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PKN1Q16512 942 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 WDR72Q3MJ13 1102 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 RNF43Q68DV7 783 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 LARGE2Q8N3Y3 721 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 RASGEF1CQ8N431 466 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 LRRC57Q8N9N7 239 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 MTA3Q9BTC8 594 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 TMEM109Q9BVC6 243 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DHX36Q9H2U1 1008 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ARMT1Q9H993 441 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ADAMTS3O15072 1205 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ADCY6O43306 1168 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 RPN1P04843 607 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 FAM200BP0CF97 657 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 KLRC1P26715 233 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 CCNFP41002 786 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DYNLL1P63167 89 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PPATQ06203 517 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 MPP2Q14168 576 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DBN1Q16643 649 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 MFSD14BQ5SR56 506 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ZNF362Q5T0B9 420 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 VSTM1Q6UX27 236 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ZDHHC24Q6UX98 284 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 LMNTD2Q8IXW0 634 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 REM2Q8IYK8 340 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ZBTB8BQ8NAP8 495 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 GIMAP8Q8ND71 665 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 IRGQQ8WZA9 623 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 CCDC42Q96M95 316 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 BRD8Q9H0E9 1235 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PCDH18Q9HCL0 1135 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 FAM114A2Q9NRY5 505 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 KRT82Q9NSB4 513 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PCDHA3Q9Y5H8 950 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ZNF532Q9HCE3 1301 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PRKAB2O43741 272 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ENTPD5O75356 428 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 FTCDO95954 541 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ITGA4P13612 1032 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 CAP2P40123 477 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 ATP11AP98196 1134 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DGKZQ13574 1117 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 MTMR3Q13615 1198 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 IMMTQ16891 758 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 KRT71Q3SY84 523 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 KHDC1Q4VXA5 237 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 C4orf32Q8N8J7 132 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 STKLD1Q8NE28 680 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 TDRD3Q9H7E2 651 aaKnown RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 TXNRD2Q9NNW7 524 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 PAK6Q9NQU5 681 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-202ENST00000339438 FGFR1OP2Q9NVK5 253 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 WDR37Q9Y2I8 494 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 STXBP5LQ9Y2K9 1186 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 DCHS1Q96JQ0 3298 aa6.01□□□□□ -1.45
CSDE1-202ENST00000339438 HELZP42694 1942 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 HNRNPRO43390 633 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 HIP1RO75146 1068 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 CREB1P16220 341 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 CYP7A1P22680 504 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 ATP2C1P98194 919 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 DHX9Q08211 1270 aaKnown RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 SNX17Q15036 470 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 CTC1Q2NKJ3 1217 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 COL13A1Q5TAT6 717 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 GMCL1P1Q8NEA9 526 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 SDR42E1Q8WUS8 393 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 UBLCP1Q8WVY7 318 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 SPIRE2Q8WWL2 714 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 MIPEPQ99797 713 aa6□□□□□ -1.45
CSDE1-202ENST00000339438 POLR3CQ9BUI4 534 aaPredicted RBP6□□□□□ -1.45
CSDE1-202ENST00000339438 IQCGQ9H095 443 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms