RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 KLRC1P26715 233 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 MCCD1P59942 119 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 MXD4Q14582 209 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 RGMBQ6NW40 437 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 ZBTB33Q86T24 672 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 PPM1KQ8N3J5 372 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 PPP1R16BQ96T49 567 aa24.29■■□□□ 1.48
PDLIM2-203ENST00000339162 SLC15A5A6NIM6 579 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 DDX3XO00571 662 aaKnown RBP eCLIP24.28■■□□□ 1.489e-11■■■■■ 33.8
PDLIM2-203ENST00000339162 MSCO60682 206 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 ALKBH5Q6P6C2 394 aaKnown RBP24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 GLYCTKQ8IVS8 523 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 KCNN1Q92952 543 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 PI4K2AQ9BTU6 479 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 ABHD16BQ9H3Z7 469 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 DOCK3Q8IZD9 2030 aa24.28■■□□□ 1.48
PDLIM2-203ENST00000339162 A0A0B4J269 797 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 MANSC4A6NHS7 340 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 TACC1O75410 805 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 USP8P40818 1118 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 SLFN12LQ6IEE8 588 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 C16orf70Q9BSU1 422 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 TCHPQ9BT92 498 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 CCDC113Q9H0I3 377 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 EPC1Q9H2F5 836 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 ADGRA2Q96PE1 1338 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 PMM2O15305 246 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 C22orf31O95567 290 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 TNNI1P19237 187 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 USP37Q86T82 979 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 FBXL13Q8NEE6 735 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 TRIM58Q8NG06 486 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 OLIG1Q8TAK6 271 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 LNX1Q8TBB1 728 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 FNBP1Q96RU3 617 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 LUC7LQ9NQ29 371 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 RAB20Q9NX57 234 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 RBAKQ9NYW8 714 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 PTPRJQ12913 1337 aa24.27■■□□□ 1.48
PDLIM2-203ENST00000339162 GAS2O43903 313 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 EFNA5P52803 228 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 NAB2Q15742 525 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 DUSP28Q4G0W2 176 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 CDCA2Q69YH5 1023 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 U2AF1L4Q8WU68 220 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 UBXN4Q92575 508 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 KREMEN1Q96MU8 473 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 KIAA1586Q9HCI6 787 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 FLRT1Q9NZU1 646 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 TMCO5BA8MYB1 307 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 CLDN3O15551 220 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 CSDE1O75534 798 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 PRKCBP05771 671 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 SCP2P22307 547 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 RFX1P22670 979 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 CHMP4BP1P59074 171 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 TRAPPC11Q7Z392 1133 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 VPS36Q86VN1 386 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 CDR2LQ86X02 465 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 ZBTB8OSQ8IWT0 167 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 EXOC8Q8IYI6 725 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 OR6J1Q8NGC5 347 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 EMID1Q96A84 441 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 COQ4Q9Y3A0 265 aa24.26■■□□□ 1.47
PDLIM2-203ENST00000339162 TRPM7Q96QT4 1865 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 SIP14410 1827 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 EFCAB8A8MWE9 144 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 H3BRB1 525 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 TNFSF9P41273 254 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 PSMD6Q15008 389 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 MAPK6Q16659 721 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 MORN1Q5T089 497 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 PPP1R13LQ8WUF5 828 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 TATDN2Q93075 761 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 MRPL4Q9BYD3 311 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 TUT1Q9H6E5 874 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 MINDY3Q9H8M7 445 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 ACP6Q9NPH0 428 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 SAR1BQ9Y6B6 198 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 EVPLQ92817 2033 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 INO80B-WBP1J3KQ70 363 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 PPFIA4O75335 1185 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 BMS1Q14692 1282 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 CCL14Q16627 93 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 TEX35Q5T0J7 233 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 IFNL1Q8IU54 200 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 TXLNBQ8N3L3 684 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 LENG1Q96BZ8 264 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 NOX5Q96PH1 765 aa24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 JPH2Q9BR39 696 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 INO80BQ9C086 356 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 SEPT11Q9NVA2 429 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-203ENST00000339162 B4GALT5O43286 388 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 MMP3P08254 477 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 GPC3P51654 580 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 MAP2K5Q13163 448 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 GRM1Q13255 1194 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 GLIPR1L2Q4G1C9 344 aa24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 PAPD7Q5XG87 772 aaKnown RBP24.24■■□□□ 1.47
PDLIM2-203ENST00000339162 PALB2Q86YC2 1186 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms