RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CTTNQ14247 550 aaKnown RBP17.4■□□□□ 0.38
LINC01116-202ENST00000339037 CWF19L1Q69YN2 538 aaKnown RBP17.4■□□□□ 0.38
LINC01116-202ENST00000339037 ASCL5Q7RTU5 278 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 COLGALT2Q8IYK4 626 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 GAD1Q99259 594 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 EIF2AQ9BY44 585 aaKnown RBP17.4■□□□□ 0.38
LINC01116-202ENST00000339037 FBXL21Q9UKT6 434 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 NR1I2O75469 434 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
LINC01116-202ENST00000339037 AOC1P19801 751 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 DSC1Q08554 894 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 TFDP1Q14186 410 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 TAS1R1Q7RTX1 841 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 TPH2Q8IWU9 490 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 HACE1Q8IYU2 909 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 STAMQ92783 540 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 CPB2Q96IY4 423 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 TRIM6Q9C030 488 aaPredicted RBP17.39■□□□□ 0.37
LINC01116-202ENST00000339037 CSRNP2Q9H175 543 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 XPNPEP1Q9NQW7 623 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 IGSF9Q9P2J2 1179 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 HES2Q9Y543 173 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 PLXNA3P51805 1871 aa17.39■□□□□ 0.37
LINC01116-202ENST00000339037 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 CCDC195A0A1B0GUA6 201 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 PRR23AA6NEV1 266 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 N4BP1O75113 896 aaKnown RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 SCNN1GP51170 649 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 CYP26C1Q6V0L0 522 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 RNF168Q8IYW5 571 aaPredicted RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 SIX5Q8N196 739 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 CCDC43Q96MW1 224 aaKnown RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 APOL6Q9BWW8 343 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 WDR6Q9NNW5 1121 aaKnown RBP17.38■□□□□ 0.37
LINC01116-202ENST00000339037 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
LINC01116-202ENST00000339037 C2orf16Q68DN1 1984 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 F8W810 466 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 PFKFB2O60825 505 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 DTNBO60941 627 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 RFPL2O75678 378 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 DGAT1O75907 488 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 SLITRK3O94933 977 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 EFEMP2O95967 443 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 NPR3P17342 541 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 GBP2P32456 591 aaPredicted RBP17.37■□□□□ 0.37
LINC01116-202ENST00000339037 DSG1Q02413 1049 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 POU5F1BQ06416 359 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 NR5A1Q13285 461 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 KIAA0319Q5VV43 1072 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 FRMD5Q7Z6J6 570 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 WASF1Q92558 559 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 EIF2AK1Q9BQI3 630 aaKnown RBP17.37■□□□□ 0.37
LINC01116-202ENST00000339037 RHOBTB2Q9BYZ6 727 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 NXF3Q9H4D5 531 aaKnown RBP17.37■□□□□ 0.37
LINC01116-202ENST00000339037 RXFP1Q9HBX9 757 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 BRMS1Q9HCU9 246 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 GIT1Q9Y2X7 761 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 CLUHO75153 1309 aa17.37■□□□□ 0.37
LINC01116-202ENST00000339037 PI15O43692 258 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 LYPLA2O95372 231 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 MYBP10242 640 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 ARF4P18085 180 aaPredicted RBP17.36■□□□□ 0.37
LINC01116-202ENST00000339037 CAPSQ13938 189 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 AMHR2Q16671 573 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 CCDC105Q8IYK2 499 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 ASAP3Q8TDY4 903 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 SMG7Q92540 1137 aaKnown RBP17.36■□□□□ 0.37
LINC01116-202ENST00000339037 NKD2Q969F2 451 aaPredicted RBP17.36■□□□□ 0.37
LINC01116-202ENST00000339037 HSD17B14Q9BPX1 270 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 RTP3Q9BQQ7 232 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 COLEC11Q9BWP8 271 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 NFKBIZQ9BYH8 718 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 CHST7Q9NS84 486 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
LINC01116-202ENST00000339037 TPCN1Q9ULQ1 816 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 PCDHA12Q9UN75 941 aa17.36■□□□□ 0.37
LINC01116-202ENST00000339037 NARSO43776 548 aaKnown RBP17.35■□□□□ 0.37
LINC01116-202ENST00000339037 SPATA31D3P0C874 917 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 KRT2P35908 639 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 CALCRLQ16602 461 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 FUT10Q6P4F1 479 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 SLC27A1Q6PCB7 646 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 SPATA31D4Q6ZUB0 917 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 HDAC7Q8WUI4 952 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 B3GALT6Q96L58 329 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 PLEKHA4Q9H4M7 779 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC01116-202ENST00000339037 ANKEF1Q9NU02 776 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 WDR70Q9NW82 654 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 MIOSQ9NXC5 875 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 EPS15L1Q9UBC2 864 aa17.35■□□□□ 0.37
LINC01116-202ENST00000339037 B4GALT5O43286 388 aa17.34■□□□□ 0.37
LINC01116-202ENST00000339037 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
LINC01116-202ENST00000339037 C1RP00736 705 aa17.34■□□□□ 0.37
LINC01116-202ENST00000339037 CFHP08603 1231 aa17.34■□□□□ 0.37
LINC01116-202ENST00000339037 GLRA2P23416 452 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms