RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.81□□□□□ -0.36
CSMD2-202ENST00000338325 R4GN57 208 aa12.81□□□□□ -0.36
CSMD2-202ENST00000338325 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 TGM5O43548 720 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 LAMP2P13473 410 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 PTENP60484 403 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 CREMQ03060 361 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 HTR4Q13639 388 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 MXD4Q14582 209 aaPredicted RBP12.8□□□□□ -0.36
CSMD2-202ENST00000338325 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 FUT10Q6P4F1 479 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 ZC3H14Q6PJT7 736 aaKnown RBP12.8□□□□□ -0.36
CSMD2-202ENST00000338325 CPLX2Q6PUV4 134 aaKnown RBP12.8□□□□□ -0.36
CSMD2-202ENST00000338325 RUFY3Q7L099 469 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 NEK8Q86SG6 692 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 PALB2Q86YC2 1186 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 GPR65Q8IYL9 337 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 B3GALT6Q96L58 329 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 APOL6Q9BWW8 343 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 PRKD2Q9BZL6 878 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 FNIP2Q9P278 1114 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 GIT1Q9Y2X7 761 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 HES2Q9Y543 173 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 DOCK6Q96HP0 2047 aa12.8□□□□□ -0.36
CSMD2-202ENST00000338325 ANHXE9PGG2 379 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 TBX3O15119 743 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 DCNP07585 359 aaKnown RBP12.79□□□□□ -0.36
CSMD2-202ENST00000338325 TFDP1Q14186 410 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 NCAPH2Q6IBW4 605 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-202ENST00000338325 GLYCTKQ8IVS8 523 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 ZNF274Q96GC6 653 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-202ENST00000338325 DYDC2Q96IM9 177 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 GPR62Q9BZJ7 368 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 TRIM6Q9C030 488 aaPredicted RBP12.79□□□□□ -0.36
CSMD2-202ENST00000338325 NXF3Q9H4D5 531 aaKnown RBP12.79□□□□□ -0.36
CSMD2-202ENST00000338325 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 XPNPEP1Q9NQW7 623 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 SLC2A4RGQ9NR83 387 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 RGL1Q9NZL6 768 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 DLGAP2Q9P1A6 1054 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 ADAM28Q9UKQ2 775 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 KCNJ14Q9UNX9 436 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 SIT1Q9Y3P8 196 aa12.79□□□□□ -0.36
CSMD2-202ENST00000338325 MARCH6O60337 910 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 CCNT1O60563 726 aaKnown RBP12.78□□□□□ -0.36
CSMD2-202ENST00000338325 SP9P0CG40 484 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 GRIK3Q13003 919 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 AMHR2Q16671 573 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 LILRA6Q6PI73 481 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 DCLRE1AQ6PJP8 1040 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 KIAA2013Q8IYS2 634 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 HAS1Q92839 578 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 RMDN1Q96DB5 314 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 NAP1L4Q99733 375 aaKnown RBP12.78□□□□□ -0.36
CSMD2-202ENST00000338325 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 ZFP37Q9Y6Q3 630 aaPredicted RBP12.78□□□□□ -0.36
CSMD2-202ENST00000338325 NUMBLQ9Y6R0 609 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 ZBTB39O15060 712 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 ZMYND10O75800 440 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 REC8O95072 547 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 ARF4P18085 180 aaPredicted RBP12.78□□□□□ -0.36
CSMD2-202ENST00000338325 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 STK3Q13188 491 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 CAPSQ13938 189 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
CSMD2-202ENST00000338325 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 PJA1Q8NG27 643 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 CYP46A1Q9Y6A2 500 aa12.78□□□□□ -0.36
CSMD2-202ENST00000338325 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.36
CSMD2-202ENST00000338325 FRYLO94915 3013 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 SF3B1O75533 1304 aaKnown RBP eCLIP12.77□□□□□ -0.37
CSMD2-202ENST00000338325 NPTXRO95502 500 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
CSMD2-202ENST00000338325 FSHRP23945 695 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 AKAP5P24588 427 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 PIK3AP1Q6ZUJ8 805 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 TPH2Q8IWU9 490 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 SHDQ96IW2 340 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
CSMD2-202ENST00000338325 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
CSMD2-202ENST00000338325 FOXQ1Q9C009 403 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms