RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SEZ6Q53EL9 994 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 TSHZ1Q6ZSZ6 1077 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 RNF180Q86T96 592 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 PCSK9Q8NBP7 692 aaKnown RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 OR8K1Q8NGG5 319 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 PARD3BQ8TEW8 1205 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 POP1Q99575 1024 aaKnown RBP15.98■□□□□ 0.15
CBX3-201ENST00000337620 GCNT4Q9P109 453 aa15.98■□□□□ 0.15
CBX3-201ENST00000337620 TRIP12Q14669 1992 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 BRCA2P51587 3418 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 DLATP10515 647 aaKnown RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 ACTN1P12814 892 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 PON1P27169 355 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 ZBED6P86452 979 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 MYL7Q01449 175 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 ZBTB41Q5SVQ8 909 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 C1orf220Q5T0J3 134 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 USP37Q86T82 979 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 TMEM139Q8IV31 216 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 KIAA1524Q8TCG1 905 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 SH3TC2Q8TF17 1288 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 ADAMTS10Q9H324 1103 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 CDHR5Q9HBB8 845 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 GTPBP10A4D1E9 387 aaKnown RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 STX10O60499 249 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 GPR32O75388 356 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 NOL4O94818 638 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 HOXC8P31273 242 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 MPZL3Q6UWV2 235 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 CRELD2Q6UXH1 353 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 SRGAP1Q7Z6B7 1085 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 TMC2Q8TDI7 906 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 CPB2Q96IY4 423 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 GCOM2Q9BZD3 368 aaPredicted RBP15.97■□□□□ 0.15
CBX3-201ENST00000337620 NLRC4Q9NPP4 1024 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 GTF2IRD1Q9UHL9 959 aa15.97■□□□□ 0.15
CBX3-201ENST00000337620 ERLIN2O94905 339 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 FGFR4P22455 802 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 POLR2FP61218 127 aaKnown RBP15.96■□□□□ 0.15
CBX3-201ENST00000337620 MCL1Q07820 350 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 HSP90AA2PQ14568 343 aaPredicted RBP15.96■□□□□ 0.15
CBX3-201ENST00000337620 NOLC1Q14978 699 aaKnown RBP eCLIP15.96■□□□□ 0.156e-7■■■□□ 15.8
CBX3-201ENST00000337620 AMHR2Q16671 573 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 ZNF568Q3ZCX4 644 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 EEF1DP3Q658K8 133 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 RRAGAQ7L523 313 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 PRIMPOLQ96LW4 560 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 DNAJC7Q99615 494 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 OSMRQ99650 979 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 RBAKQ9NYW8 714 aaPredicted RBP15.96■□□□□ 0.15
CBX3-201ENST00000337620 TNFSF13BQ9Y275 285 aa15.96■□□□□ 0.15
CBX3-201ENST00000337620 SCN10AQ9Y5Y9 1956 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 PROZP22891 400 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 CETN1Q12798 172 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 FNBP1Q96RU3 617 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 NAA15Q9BXJ9 866 aaKnown RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 PTPRHQ9HD43 1115 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 PLCB1Q9NQ66 1216 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 TOPORSQ9NS56 1045 aaPredicted RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 WBP1LQ9NX94 342 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 CEP72Q9P209 647 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 CNTNAP2Q9UHC6 1331 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 ABLIM1O14639 778 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 OGTO15294 1046 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 N4BP1O75113 896 aaKnown RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 ARF4P18085 180 aaPredicted RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 TNFSF9P41273 254 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 MXI1P50539 228 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 KLHDC7AQ5VTJ3 777 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 LHX8Q68G74 356 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 EDEM3Q9BZQ6 932 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 TMEM117Q9H0C3 514 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
CBX3-201ENST00000337620 ZNHIT6Q9NWK9 470 aaKnown RBP15.95■□□□□ 0.14
CBX3-201ENST00000337620 ARHGAP6O43182 974 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 TSPAN1O60635 241 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 MYCP01106 439 aaPredicted RBP15.94■□□□□ 0.14
CBX3-201ENST00000337620 TNNI1P19237 187 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 ACLYP53396 1101 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 MCCD1P59942 119 aaPredicted RBP15.94■□□□□ 0.14
CBX3-201ENST00000337620 C1QTNF8P60827 252 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 OSTNP61366 133 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 PSMD6Q15008 389 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 TAF2Q6P1X5 1199 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 TRIM65Q6PJ69 517 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 NME8Q8N427 588 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 INTS2Q9H0H0 1204 aaKnown RBP15.94■□□□□ 0.14
CBX3-201ENST00000337620 GANQ9H2C0 597 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 SOWAHDA6NJG2 315 aa15.94■□□□□ 0.14
CBX3-201ENST00000337620 LRRC53A6NM62 1247 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms