RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 GAS7O60861 476 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CA4P22748 312 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 GNA11P29992 359 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CIITAP33076 1130 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 AARSP49588 968 aaKnown RBP eCLIP6.4□□□□□ -1.383e-6■□□□□ 8.7
CDC42BPA-201ENST00000334218 ZNF75DP51815 510 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 PMPCAQ10713 525 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 SEMA3AQ14563 771 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 DUS1LQ6P1R4 473 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 NME9Q86XW9 330 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCDC24Q8N4L8 307 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CCDC185Q8N715 623 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 EXD1Q8NHP7 514 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 GANCQ8TET4 914 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 SSX3Q99909 188 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 INTS2Q9H0H0 1204 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 IVNS1ABPQ9Y6Y0 642 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 H7C2Y5 167 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF658Q5TYW1 1059 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 C3orf33Q6P1S2 294 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 C19orf18Q8NEA5 215 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 NEUROG2Q9H2A3 272 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 NFE2L3Q9Y4A8 694 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 KCNQ3O43525 872 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 HAUS5O94927 633 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 ABCB4P21439 1286 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 IST1P53990 364 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 DZIP3Q86Y13 1208 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 EIF2B3Q9NR50 452 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 TBK1Q9UHD2 729 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CAMSAP2Q08AD1 1489 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDH3P22223 829 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 SFNP31947 248 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 ZNF699Q32M78 642 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 COBLL1Q53SF7 1204 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDCA7Q9BWT1 371 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 MYLK2Q9H1R3 596 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 GPC6Q9Y625 555 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 TRAPPC8Q9Y2L5 1435 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 RAD51BO15315 384 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 RPL4P36578 427 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 ORC2Q13416 577 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CDO1Q16878 200 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 FBXO31Q5XUX0 539 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 CALML4Q96GE6 196 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 FAM129BQ96TA1 746 aa6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 C8orf33Q9H7E9 229 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-201ENST00000334218 C2orf81A6NN90 581 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 CFAP99D6REC4 459 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 NPM3O75607 178 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 STAT5AP42229 794 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 STAT5BP51692 787 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZRANB3Q5FWF4 1079 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 EIF3MQ7L2H7 374 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 CCDC127Q96BQ5 260 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMED9Q9BVK6 235 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 RIOK2Q9BVS4 552 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 EXO5Q9H790 373 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRNAU1APQ9NX07 287 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 MYH2Q9UKX2 1941 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 APAF1O14727 1248 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 PJA2O43164 708 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 MED26O95402 600 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 ITGB1P05556 798 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARHGAP17Q68EM7 881 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 WDR49Q8IV35 697 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 BRSK2Q8IWQ3 736 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUP93Q8N1F7 819 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUDT16Q96DE0 195 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLC26A6Q9BXS9 759 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 LSG1Q9H089 658 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 NOC2LQ9Y3T9 749 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 TTC3P53804 2025 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 SYNGAP1Q96PV0 1343 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 IBTKQ9P2D0 1353 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKR1B10O60218 316 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 MMP14P50281 582 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 PDE3AQ14432 1141 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 HECTD3Q5T447 861 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMED8Q6PL24 325 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 SLF2Q8IX21 1173 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 SMYD4Q8IYR2 804 aaPredicted RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 TBC1D32Q96NH3 1257 aa6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 ZMAT5Q9UDW3 170 aaKnown RBP6.4□□□□□ -1.39
CDC42BPA-201ENST00000334218 LINC00854A0A1B0GVQ3 168 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRAF3Q13114 568 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 MTFR1Q15390 333 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TYW1BQ6NUM6 668 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TOGARAM2Q6ZUX3 1019 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 GSTA5Q7RTV2 222 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHPFQ8IZ52 775 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMEM87BQ96K49 555 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHCHD6Q9BRQ6 235 aa6.39□□□□□ -1.39
CDC42BPA-201ENST00000334218 TMEM165Q9HC07 324 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms