RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 KIAA1217Q5T5P2 1943 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 HSPA9P38646 679 aaKnown RBP20.38■□□□□ 0.85
RFTN1-201ENST00000334133 WNT7BP56706 349 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 PRKCEQ02156 737 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 ZDHHC14Q8IZN3 488 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 UTP11Q9Y3A2 253 aaKnown RBP20.38■□□□□ 0.85
RFTN1-201ENST00000334133 RPS6KA5O75582 802 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 CYP11B1P15538 503 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 ACOT2P49753 483 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 CUL1Q13616 776 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 SRLQ86TD4 932 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 HELQQ8TDG4 1101 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 ZNF653Q96CK0 615 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 NUP85Q9BW27 656 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 JPH1Q9HDC5 661 aaPredicted RBP20.38■□□□□ 0.85
RFTN1-201ENST00000334133 EXOC7Q9UPT5 735 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 ATP8A1Q9Y2Q0 1164 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 SNX24Q9Y343 169 aa20.38■□□□□ 0.85
RFTN1-201ENST00000334133 MYO1CO00159 1063 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 SHOX2O60902 331 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 ACTR2P61160 394 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 DR1Q01658 176 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 DHX9Q08211 1270 aaKnown RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 SEZ6Q53EL9 994 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 DAB2IPQ5VWQ8 1189 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 MREGQ8N565 214 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 NSUN6Q8TEA1 469 aaKnown RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 VPS33BQ9H267 617 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 RAB20Q9NX57 234 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 LOXHD1Q8IVV2 1947 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 RTN2O75298 545 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 PPFIA4O75335 1185 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 MFAP3P55082 362 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 IRX5P78411 483 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 CNTN2Q02246 1040 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 SPOPLQ6IQ16 392 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 OTUD6AQ7L8S5 288 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 RHOT2Q8IXI1 618 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 TRPM4Q8TD43 1214 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 IWS1Q96ST2 819 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 TRIM7Q9C029 511 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 POLR3FQ9H1D9 316 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 ST6GALNAC4Q9H4F1 302 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 COL11A1P12107 1806 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 STBD1O95210 358 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 RFX1P22670 979 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 POU5F1Q01860 360 aaKnown RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 TAS1R3Q7RTX0 852 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 FBXL13Q8NEE6 735 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 REPS2Q8NFH8 660 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 ZBTB45Q96K62 511 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-201ENST00000334133 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 CARD9Q9H257 536 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 SLITRK6Q9H5Y7 841 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 CYP39A1Q9NYL5 469 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 PTPN22Q9Y2R2 807 aa20.37■□□□□ 0.85
RFTN1-201ENST00000334133 P4HA2O15460 535 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 SPOPO43791 374 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 PYGMP11217 842 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 SEPT14Q6ZU15 432 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 SHC3Q92529 594 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 HARSP12081 509 aaKnown RBP20.36■□□□□ 0.85
RFTN1-201ENST00000334133 NR1D1P20393 614 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 PLTPP55058 493 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 CYP24A1Q07973 514 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 UHMK1Q8TAS1 419 aaKnown RBP20.36■□□□□ 0.85
RFTN1-201ENST00000334133 ZNF564Q8TBZ8 553 aaPredicted RBP20.36■□□□□ 0.85
RFTN1-201ENST00000334133 ATP6V0A1Q93050 837 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 FAM107BQ9H098 131 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 CYP26B1Q9NR63 512 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 ZNF541Q9H0D2 1346 aa20.36■□□□□ 0.85
RFTN1-201ENST00000334133 EIF3HO15372 352 aaKnown RBP eCLIP20.35■□□□□ 0.85
RFTN1-201ENST00000334133 DSG3P32926 999 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 KCNJ1P48048 391 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 SCARA3Q6AZY7 606 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 ZNF516Q92618 1163 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 ATP6V1G3Q96LB4 118 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 TMEM8AQ9HCN3 771 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 MAP3K20Q9NYL2 800 aaKnown RBP20.35■□□□□ 0.85
RFTN1-201ENST00000334133 PTENP60484 403 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 ZNF844Q08AG5 666 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 UBAP2Q5T6F2 1119 aaKnown RBP20.35■□□□□ 0.85
RFTN1-201ENST00000334133 ATP8B4Q8TF62 1192 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 GPRASP2Q96D09 838 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 ZSWIM1Q9BR11 485 aa20.35■□□□□ 0.85
RFTN1-201ENST00000334133 DCDC2CA8MYV0 355 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 PSAPP07602 524 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 PDE6CP51160 858 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 SEC24CP53992 1094 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 ZBTB41Q5SVQ8 909 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 EEPD1Q7L9B9 569 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 CPA5Q8WXQ8 436 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 KIFAP3Q92845 792 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 TNNI1P19237 187 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 DCAF15Q66K64 600 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 TTC27Q6P3X3 843 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 TMC3Q7Z5M5 1100 aa20.34■□□□□ 0.85
RFTN1-201ENST00000334133 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms