RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ZFPM1Q8IX07 1006 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 DNAJC18Q9H819 358 aa25.34■■□□□ 1.65
TSKU-201ENST00000333090 NOP53Q9NZM5 478 aaKnown RBP25.34■■□□□ 1.65
TSKU-201ENST00000333090 C10orf71Q711Q0 1435 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 KRT16P08779 473 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 SLC8A3P57103 927 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 CDC42EP5Q6NZY7 148 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 EP400NLQ6ZTU2 488 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 CCDC17Q96LX7 622 aa25.33■■□□□ 1.65
TSKU-201ENST00000333090 DLATP10515 647 aaKnown RBP25.33■■□□□ 1.64
TSKU-201ENST00000333090 RFX1P22670 979 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 BNIP1Q12981 228 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 RRP1BQ14684 758 aaKnown RBP25.33■■□□□ 1.64
TSKU-201ENST00000333090 RNF207Q6ZRF8 634 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 MIGA2Q7L4E1 593 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 SPATA21Q7Z572 469 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 GBP7Q8N8V2 638 aaPredicted RBP25.33■■□□□ 1.64
TSKU-201ENST00000333090 FAXDC2Q96IV6 333 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 PCDHB18PQ96TA0 734 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 PCIF1Q9H4Z3 704 aa25.33■■□□□ 1.64
TSKU-201ENST00000333090 RTN2O75298 545 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 GH1P01241 217 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 SIX1Q15475 284 aaPredicted RBP25.32■■□□□ 1.64
TSKU-201ENST00000333090 C1orf54Q8WWF1 131 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 CD101Q93033 1021 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 ACP6Q9NPH0 428 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 AAASQ9NRG9 546 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 DIAPH2O60879 1101 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 ALADP13716 330 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 SNX1Q13596 522 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 LRCH2Q5VUJ6 765 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 OTOP1Q7RTM1 612 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 KAT5Q92993 513 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 TRIM6Q9C030 488 aaPredicted RBP25.32■■□□□ 1.64
TSKU-201ENST00000333090 ASIC3Q9UHC3 531 aa25.32■■□□□ 1.64
TSKU-201ENST00000333090 TAF1LQ8IZX4 1826 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 CHKAP35790 457 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 GCLMP48507 274 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 FITM2Q8N6M3 262 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 MAB21L3Q8N8X9 362 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 ZNF564Q8TBZ8 553 aaPredicted RBP25.31■■□□□ 1.64
TSKU-201ENST00000333090 SERPINB12Q96P63 405 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 NUP85Q9BW27 656 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 TUFT1Q9NNX1 390 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 SEL1LQ9UBV2 794 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 TRIM33Q9UPN9 1127 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 ARL2BPQ9Y2Y0 163 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 CLDN3O15551 220 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 SGPL1O95470 568 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 KRT17Q04695 432 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 SPICE1Q8N0Z3 855 aa25.31■■□□□ 1.64
TSKU-201ENST00000333090 SKAP2O75563 359 aaPredicted RBP25.3■■□□□ 1.64
TSKU-201ENST00000333090 CETN1Q12798 172 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 TCP10Q12799 353 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 TISP43B9A030 160 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 F5H6K3 240 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 PPP3CAQ08209 521 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 ADCY1Q08828 1119 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 CERKLQ49MI3 558 aaPredicted RBP25.3■■□□□ 1.64
TSKU-201ENST00000333090 NSMFQ6X4W1 530 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 MKL1Q969V6 931 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 IFT74Q96LB3 600 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 WDR18Q9BV38 432 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 UBE4BO95155 1302 aa25.3■■□□□ 1.64
TSKU-201ENST00000333090 IGLV3-22A0A075B6J6 115 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 TP73O15350 636 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 BRAFP15056 766 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 ATP5DP30049 168 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 RWDD2BP57060 319 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 MPP2Q14168 576 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 ZNF568Q3ZCX4 644 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 CERKQ8TCT0 537 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 ICA1Q05084 483 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 TCEAL1Q15170 157 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 KYNUQ16719 465 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 SGO2Q562F6 1265 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 NOP9Q86U38 636 aaKnown RBP25.29■■□□□ 1.64
TSKU-201ENST00000333090 CKAP2Q8WWK9 683 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 RMDN2Q96LZ7 410 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 TGS1Q96RS0 853 aaKnown RBP25.29■■□□□ 1.64
TSKU-201ENST00000333090 NYAP2Q9P242 653 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 WRAP73Q9P2S5 460 aaPredicted RBP25.29■■□□□ 1.64
TSKU-201ENST00000333090 TBK1Q9UHD2 729 aa25.29■■□□□ 1.64
TSKU-201ENST00000333090 CCND1P24385 295 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 MSH2P43246 934 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 TRIP13Q15645 432 aaPredicted RBP25.28■■□□□ 1.64
TSKU-201ENST00000333090 MAEAQ7L5Y9 396 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 EPS8L1Q8TE68 723 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 MORC4Q8TE76 937 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 CRAMP1Q96RY5 1269 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 RXFP1Q9HBX9 757 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 GJB6O95452 261 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 CDC25CP30307 473 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 STX2P32856 288 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 ERICH1Q86X53 443 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 ZNF653Q96CK0 615 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 ZNF570Q96NI8 536 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 LRRC19Q9H756 370 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 ARHGEF3Q9NR81 526 aa25.28■■□□□ 1.64
TSKU-201ENST00000333090 ZNF219Q9P2Y4 722 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms