RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 NLRC5Q86WI3 1866 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 GTPBP6O43824 516 aaPredicted RBP17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 OFD1O75665 1012 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 TOM1L1O75674 476 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 MYBP10242 640 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 PROZP22891 400 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 CTNNB1P35222 781 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 MATR3P43243 847 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 CASP5P51878 434 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 MRPL9Q9BYD2 267 aaKnown RBP17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 PTPRHQ9HD43 1115 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 UBN1Q9NPG3 1134 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 SNTG2Q9NY99 539 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 PARP2Q9UGN5 583 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 KIAA1671Q9BY89 1806 aa17.42■□□□□ 0.38
CCDC28A-201ENST00000332797 RALGAPA2Q2PPJ7 1873 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 PVALEFA0A1B0GWK0 134 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 EPOPA6NHQ4 379 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 PPP1R37O75864 691 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 LINC00271P0C7V0 271 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 MLH1P40692 756 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 SNW1Q13573 536 aaKnown RBP17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 ALCAMQ13740 583 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 EPC2Q52LR7 807 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 FAM26FQ5R3K3 315 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 LRRC55Q6ZSA7 311 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 FBXO22Q8NEZ5 403 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 ENGASEQ8NFI3 743 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 URGCPQ8TCY9 931 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 CLP1Q92989 425 aaKnown RBP17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 CCDC34Q96HJ3 373 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 SAMD11Q96NU1 681 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 STRA6Q9BX79 667 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 MTMR10Q9NXD2 777 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 GDAQ9Y2T3 454 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 GIT1Q9Y2X7 761 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 PCDHB13Q9Y5F0 798 aa17.41■□□□□ 0.38
CCDC28A-201ENST00000332797 COL4A4P53420 1690 aaPredicted RBP17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 ARL5CA6NH57 179 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 ABLIM1O14639 778 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 KLRC4O43908 158 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 PIGRP01833 764 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 MYL1P05976 194 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 MCF2P10911 925 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 AFF1P51825 1210 aaKnown RBP17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 KANK3Q6NY19 840 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 CEP120Q8N960 986 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 GLIS3Q8NEA6 775 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 RSPH1Q8WYR4 309 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 GUCD1Q96NT3 240 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 ACCSQ96QU6 501 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 GAD1Q99259 594 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 CWH43Q9H720 699 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 EXOC1Q9NV70 894 aa17.4■□□□□ 0.38
CCDC28A-201ENST00000332797 RFXAPO00287 272 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 CLDN3O15551 220 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 NR1I2O75469 434 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 RECQL4O94761 1208 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 PRPF6O94906 941 aaKnown RBP17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 POMCP01189 267 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 BMPR1AP36894 532 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 OSTNP61366 133 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 UBE2HP62256 183 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 EHHADHQ08426 723 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 KCNA1Q09470 495 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 SLC39A4Q6P5W5 647 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 GDPD5Q8WTR4 605 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 GBP3Q9H0R5 595 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 IKZF4Q9H2S9 585 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 TBC1D13Q9NVG8 400 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
CCDC28A-201ENST00000332797 TISP43B9A030 160 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 ANKRD63C9JTQ0 380 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 LAG3P18627 525 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 GRM5P41594 1212 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 SCNN1GP51170 649 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 MCL1Q07820 350 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 DPYDQ12882 1025 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 POSTNQ15063 836 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 KMT5BQ4FZB7 885 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 CLEC17AQ6ZS10 378 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
CCDC28A-201ENST00000332797 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms