RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 TRPV2Q9Y5S1 764 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 CDY2AQ9Y6F7 541 aa13.17□□□□□ -0.3
TRIM49B-201ENST00000332682 M0QZ92 97 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CTSHP09668 335 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 HARSP12081 509 aaKnown RBP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 KRT13P13646 458 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 SFPQP23246 707 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 THPOP40225 353 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CDK7P50613 346 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CYP24A1Q07973 514 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 KCNH2Q12809 1159 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 FKBP15Q5T1M5 1219 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 TCERG1LQ5VWI1 586 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CRELD2Q6UXH1 353 aaPredicted RBP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 TMC6Q7Z403 805 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CDR2LQ86X02 465 aaPredicted RBP13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CPB2Q96IY4 423 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 TCHPQ9BT92 498 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 CDT1Q9H211 546 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 KIAA1586Q9HCI6 787 aa13.16□□□□□ -0.3
TRIM49B-201ENST00000332682 ITIH6Q6UXX5 1313 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 A0A1B0GUA9 196 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 OGTO15294 1046 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 CHRNA1P02708 482 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 ACOT2P49753 483 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 VAMP7P51809 220 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 DLG4P78352 724 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 C1orf220Q5T0J3 134 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 AGPAT5Q9NUQ2 364 aa13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.3
TRIM49B-201ENST00000332682 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 RBAK-RBAKDNI3L0D1 243 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 CAND2O75155 1236 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 MCF2P10911 925 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 TNFSF9P41273 254 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 GJA8P48165 433 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 ENPEPQ07075 957 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 SYCP1Q15431 976 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 SEZ6Q53EL9 994 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 FAM228AQ86W67 206 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 CEP120Q8N960 986 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 CPSF3Q9UKF6 684 aaKnown RBP13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 SIK3Q9Y2K2 1263 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 NOC2LQ9Y3T9 749 aaKnown RBP13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 ANK1P16157 1881 aa13.14□□□□□ -0.31
TRIM49B-201ENST00000332682 AXLP30530 894 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 FMO5P49326 533 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 KLK7P49862 253 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 WNT7BP56706 349 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 TBX2Q13207 712 aaPredicted RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 PSMD6Q15008 389 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 FAM26DQ5JW98 314 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 BRSK2Q8IWQ3 736 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CCDC127Q96BQ5 260 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 LRRIQ3A6PVS8 624 aaPredicted RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CD4P01730 458 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 COL6A1P12109 1028 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CKBP12277 381 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 PPP3CAQ08209 521 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 RBL2Q08999 1139 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 NCBP1Q09161 790 aaKnown RBP13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CBWD6Q4V339 395 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CBWD3Q5JTY5 395 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 FBXO47Q5MNV8 452 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 CBWD5Q5RIA9 395 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 ZNF618Q5T7W0 954 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
TRIM49B-201ENST00000332682 THNSL1Q8IYQ7 743 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms