RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 ERP27Q96DN0 273 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 GFPT2O94808 682 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 BRAFP15056 766 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 SKIV2L2P42285 1042 aaKnown RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 CRKP46108 304 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 PABPC1LQ4VXU2 614 aaKnown RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 CMPK2Q5EBM0 449 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 ECHDC2Q86YB7 292 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 CTNNBL1Q8WYA6 563 aaPredicted RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 TRAPPC9Q96Q05 1148 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 PITPNM3Q9BZ71 974 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 RMI1Q9H9A7 625 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 GRHL1Q9NZI5 618 aa19.43■□□□□ 0.7
PKP3-201ENST00000331563 TTC7AQ9ULT0 858 aaPredicted RBP19.43■□□□□ 0.7
PKP3-201ENST00000331563 DDX60LQ5H9U9 1706 aaKnown RBP19.42■□□□□ 0.7
PKP3-201ENST00000331563 E7ENQ6 273 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 DDX3XO00571 662 aaKnown RBP eCLIP19.42■□□□□ 0.73e-24■■■■■ 37.6
PKP3-201ENST00000331563 GNA11P29992 359 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 MGAT5Q09328 741 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 CKAP2Q8WWK9 683 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 TEKT1Q969V4 418 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 SCOCQ9UIL1 159 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 A0A0A6YYK5 440 aaPredicted RBP19.42■□□□□ 0.7
PKP3-201ENST00000331563 NR2F2P24468 414 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 FAM13CQ8NE31 585 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 MYLK2Q9H1R3 596 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 CARD9Q9H257 536 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 GALNT8Q9NY28 637 aa19.42■□□□□ 0.7
PKP3-201ENST00000331563 DLEC1Q9Y238 1755 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 ATP5DP30049 168 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 PSMC4P43686 418 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 DPY19L2Q6NUT2 758 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 GJB7Q6PEY0 223 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 CCDC105Q8IYK2 499 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 CCDC97Q96F63 343 aaPredicted RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 RUNDC3BQ96NL0 473 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 GPCPD1Q9NPB8 672 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 NKIRAS1Q9NYS0 192 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 CTNNAL1Q9UBT7 734 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 PRKAG3Q9UGI9 489 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 TBK1Q9UHD2 729 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 SCN9AQ15858 1988 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 PALM3A6NDB9 673 aaPredicted RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 DDX3YO15523 660 aaKnown RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 KRT18P05783 430 aaKnown RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 RARGP13631 454 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 DRG2P55039 364 aaKnown RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 DNAJC14Q6Y2X3 702 aaPredicted RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 GLYCTKQ8IVS8 523 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 AGGF1Q8N302 714 aaeCLIP19.41■□□□□ 0.74e-7■■■■■ 39.4
PKP3-201ENST00000331563 TTC8Q8TAM2 541 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 UCMAQ8WVF2 138 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 IFT43Q96FT9 208 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 PIGSQ96S52 555 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 TMEM109Q9BVC6 243 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 MAF1Q9H063 256 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 OCEL1Q9H607 264 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 ZNF287Q9HBT7 754 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 DMAP1Q9NPF5 467 aaPredicted RBP19.41■□□□□ 0.7
PKP3-201ENST00000331563 TMEM260Q9NX78 707 aa19.41■□□□□ 0.7
PKP3-201ENST00000331563 TNS1Q9HBL0 1735 aaKnown RBP19.4■□□□□ 0.7
PKP3-201ENST00000331563 ENTPD5O75356 428 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 AFPP02771 609 aaKnown RBP19.4■□□□□ 0.7
PKP3-201ENST00000331563 GM2AP17900 193 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 PON1P27169 355 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 RNF43Q68DV7 783 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 OR52E8Q6IFG1 317 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 VSTM1Q6UX27 236 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 SUPT20HQ8NEM7 779 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 NDNQ99608 321 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 ATXN10Q9UBB4 475 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 SERPINB13Q9UIV8 391 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 DIS3Q9Y2L1 958 aaKnown RBP19.4■□□□□ 0.7
PKP3-201ENST00000331563 LRRC37AA6NMS7 1700 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 TMEM110-MUSTN1A8MSY1 372 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 ACADSP16219 412 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 NPEPPSP55786 919 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 PARP6Q2NL67 630 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 MFSD5Q6N075 450 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 CCDC137Q6PK04 289 aaKnown RBP19.4■□□□□ 0.7
PKP3-201ENST00000331563 SEPT14Q6ZU15 432 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 CCDC65Q8IXS2 484 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.4■□□□□ 0.7
PKP3-201ENST00000331563 REXO1Q8N1G1 1221 aaKnown RBP19.4■□□□□ 0.7
PKP3-201ENST00000331563 ASAP3Q8TDY4 903 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 UIMC1Q96RL1 719 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 PREBQ9HCU5 417 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 EMILIN3Q9NT22 766 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 STK32BQ9NY57 414 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 PFASO15067 1338 aa19.4■□□□□ 0.7
PKP3-201ENST00000331563 DDTLA6NHG4 134 aaPredicted RBP19.39■□□□□ 0.7
PKP3-201ENST00000331563 PODXLO00592 558 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 PHF2O75151 1096 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 LGR5O75473 907 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 EPHB2P29323 1055 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 SLC16A2P36021 539 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 CALCOCO2Q13137 446 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 RCN2Q14257 317 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 RFFLQ8WZ73 363 aa19.39■□□□□ 0.7
PKP3-201ENST00000331563 LRRC37BQ96QE4 947 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms