RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 RNF149Q8NC42 400 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 CCDC151A5D8V7 595 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 TTLL13PA6NNM8 815 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 PMM2O15305 246 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 EXTL3O43909 919 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 MXI1P50539 228 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZNF484Q5JVG2 852 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 RHPN2Q8IUC4 686 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 METTL13Q8N6R0 699 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZIC5Q96T25 663 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 STK33Q9BYT3 514 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 IFIH1Q9BYX4 1025 aaKnown RBP21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZFYVE28Q9HCC9 887 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 AGO2Q9UKV8 859 aaKnown RBP21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 DUSP10Q9Y6W6 482 aa21.98■■□□□ 1.11
RIPPLY3-201ENST00000329553 EVPLQ92817 2033 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZNF233A6NK53 670 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 HOXC6P09630 235 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 CLCN3P51790 818 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 EFNA5P52803 228 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 TUBB4BP68371 445 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 BRD3Q15059 726 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 CDCA2Q69YH5 1023 aaPredicted RBP21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 SLFN12LQ6IEE8 588 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 OR6J1Q8NGC5 347 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 USP6NLQ92738 828 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 CCDC102AQ96A19 550 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 CCDC113Q9H0I3 377 aa21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 TOPORSQ9NS56 1045 aaPredicted RBP21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 ABT1Q9ULW3 272 aaKnown RBP21.97■■□□□ 1.11
RIPPLY3-201ENST00000329553 RBAK-RBAKDNI3L0D1 243 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 KRT86O43790 486 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 C22orf31O95567 290 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 MAGEA1P43355 309 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 MAP2K1Q02750 393 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 TNFAIP2Q03169 654 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 PTK2Q05397 1052 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 DRAP1Q14919 205 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZNF668Q96K58 619 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 NAPGQ99747 312 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 FUT8Q9BYC5 575 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 ANKZF1Q9H8Y5 726 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 KIAA1586Q9HCI6 787 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 H3BRB1 525 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 MSCO60682 206 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 MMP3P08254 477 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 KLRC1P26715 233 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 ACOT2P49753 483 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 NLRP11P59045 1033 aaKnown RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 CRHR2Q13324 411 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 CCL14Q16627 93 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 CRELD2Q6UXH1 353 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 ZNF571Q7Z3V5 609 aaPredicted RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 GPR88Q9GZN0 384 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 TUT1Q9H6E5 874 aaKnown RBP21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 ADAMTS1Q9UHI8 967 aa21.96■■□□□ 1.11
RIPPLY3-201ENST00000329553 A0A0B4J269 797 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 KIAA0391O15091 583 aaKnown RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 DLATP10515 647 aaKnown RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 HOXD8P13378 290 aaPredicted RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 CYP2B6P20813 491 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 PRKCIP41743 596 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 STAT1P42224 750 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 KIF5AQ12840 1032 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 MSANTD4Q8NCY6 345 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 ANKFY1Q9P2R3 1169 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 PUF60Q9UHX1 559 aaKnown RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 GJD2Q9UKL4 321 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 BZW2Q9Y6E2 419 aaKnown RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 A0A087X0T9 212 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 F8VZ95 297 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 GFPT2O94808 682 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 FAM228BP0C875 321 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 SREBF2Q12772 1141 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 SLC18A3Q16572 532 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 KRT39Q6A163 491 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZBTB8OSQ8IWT0 167 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 HNRNPLLQ8WVV9 542 aaKnown RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 SEMA4DQ92854 862 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 GPBP1L1Q9HC44 474 aaPredicted RBP21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 TMEM8AQ9HCN3 771 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 RAB21Q9UL25 225 aa21.95■■□□□ 1.1
RIPPLY3-201ENST00000329553 CYP2C19P33261 490 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 SOX5P35711 763 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 MATR3P43243 847 aaKnown RBP eCLIP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ENPEPQ07075 957 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 WHAMMP3Q1A5X7 153 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZBTB41Q5SVQ8 909 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZPBP2Q6X784 338 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 USP37Q86T82 979 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ARHGEF19Q8IW93 802 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 NLRP4Q96MN2 994 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 MSTO1Q9BUK6 570 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 UBE2TQ9NPD8 197 aaPredicted RBP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 DYNC1LI2O43237 492 aaPredicted RBP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 ZNF865P0CJ78 1059 aaPredicted RBP21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 GTF2H1P32780 548 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 TM4SF4P48230 202 aa21.94■■□□□ 1.1
RIPPLY3-201ENST00000329553 WNT7BP56706 349 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms