RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GRM6O15303 877 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 FGF18O76093 207 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 RECQL4O94761 1208 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 ITGB1P05556 798 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 ALDH7A1P49419 539 aaKnown RBP16.27■□□□□ 0.2
CLRN1-203ENST00000328863 GRIK3Q13003 919 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 NOLC1Q14978 699 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLRN1-203ENST00000328863 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
CLRN1-203ENST00000328863 E2F4Q16254 413 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 ZPBP2Q6X784 338 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 TAS1R3Q7RTX0 852 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 HAUS6Q7Z4H7 955 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 TMEM169Q96HH4 297 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 GAD1Q99259 594 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 ACO2Q99798 780 aaKnown RBP16.27■□□□□ 0.2
CLRN1-203ENST00000328863 TMEM175Q9BSA9 504 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 NSUN3Q9H649 340 aaKnown RBP16.27■□□□□ 0.2
CLRN1-203ENST00000328863 PARP2Q9UGN5 583 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 PLAGL2Q9UPG8 496 aa16.27■□□□□ 0.2
CLRN1-203ENST00000328863 MYMKA6NI61 221 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 TOM1L1O75674 476 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 CSPG5O95196 566 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 POMCP01189 267 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 IDEP14735 1019 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 AKAP5P24588 427 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 LIG4P49917 911 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 SCNN1GP51170 649 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 BCAR1P56945 870 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 KRT17Q04695 432 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 SFR1Q86XK3 245 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 SLC39A11Q8N1S5 342 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 TCHPQ9BT92 498 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 CCDC94Q9BW85 323 aaPredicted RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 PANK2Q9BZ23 570 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 CDT1Q9H211 546 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 ALG13Q9NP73 1137 aaKnown RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 TLR9Q9NR96 1032 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 TOPORSQ9NS56 1045 aaPredicted RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 SPG21Q9NZD8 308 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 PUF60Q9UHX1 559 aaKnown RBP16.26■□□□□ 0.19
CLRN1-203ENST00000328863 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
CLRN1-203ENST00000328863 POLR2DO15514 142 aaKnown RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 NR1I2O75469 434 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 MCF2P10911 925 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 HARSP12081 509 aaKnown RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 PBX3P40426 434 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 MATR3P43243 847 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 YARSP54577 528 aaKnown RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 PLCB3Q01970 1234 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 ALCAMQ13740 583 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 MAP4K3Q8IVH8 894 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 CEP57L1Q8IYX8 460 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 MRPS27Q92552 414 aaKnown RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 ZFP42Q96MM3 310 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 NRDE2Q9H7Z3 1164 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 MRPL44Q9H9J2 332 aaKnown RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 OLFML3Q9NRN5 406 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 STK39Q9UEW8 545 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 KCNH3Q9ULD8 1083 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 CIZ1Q9ULV3 898 aaPredicted RBP16.25■□□□□ 0.19
CLRN1-203ENST00000328863 USP20Q9Y2K6 914 aa16.25■□□□□ 0.19
CLRN1-203ENST00000328863 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 PIGRP01833 764 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 PROZP22891 400 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 GRM5P41594 1212 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 ASIC1P78348 528 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
CLRN1-203ENST00000328863 PDE12Q6L8Q7 609 aaKnown RBP16.24■□□□□ 0.19
CLRN1-203ENST00000328863 STXBP4Q6ZWJ1 553 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 SPPL3Q8TCT6 385 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 DNAJC19Q96DA6 116 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 TRIM9Q9C026 710 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 ST6GALNAC4Q9H4F1 302 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 PTPRHQ9HD43 1115 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 ENTPD7Q9NQZ7 604 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 TBX20Q9UMR3 447 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 GDAQ9Y2T3 454 aa16.24■□□□□ 0.19
CLRN1-203ENST00000328863 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 FRMD3A2A2Y4 597 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 CLDN3O15551 220 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 GCNT3O95395 438 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 PFKFB1P16118 471 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 CMA1P23946 247 aa16.23■□□□□ 0.19
CLRN1-203ENST00000328863 NMT1P30419 496 aaKnown RBP16.23■□□□□ 0.19
CLRN1-203ENST00000328863 SLC11A1P49279 550 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms